RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 HOXB5P09067 269 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 HNRNPA1P09651 372 aaKnown RBP eCLIP13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 XCR1P46094 333 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 TLE4Q04727 773 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 WBP2NLQ6ICG8 309 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 H3F3CQ6NXT2 135 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 GRASPQ7Z6J2 395 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 OR4K15Q8NH41 348 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 MED18Q9BUE0 208 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 NIT2Q9NQR4 276 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 ZNF629Q9UEG4 869 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 CLEC2DQ9UHP7 191 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 RHBDD3Q9Y3P4 386 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 ANKRD12Q6UB98 2062 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 PLGLB1Q02325 96 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 SLC14A1Q13336 389 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 PAN3Q58A45 887 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 ZMAT1Q5H9K5 638 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 SIGIRRQ6IA17 410 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 ZNF680Q8NEM1 530 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 A0A1B0GTW7 788 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 CPED1A4D0V7 1026 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 MBLAC1A4D2B0 266 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 TMEM189-UBE2V1I3L0A0 370 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 HTR2CP28335 458 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 TAS2R30P59541 319 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 OR56B1Q8NGI3 324 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 OR4Q3Q8NH05 313 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 LMX1AQ8TE12 382 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 GPATCH2Q9NW75 528 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 EHFQ9NZC4 300 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 TRAPPC4Q9Y296 219 aa13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 PUS1Q9Y606 427 aaKnown RBP eCLIP13.95□□□□□ -0.18
SMARCA4-207ENST00000541122 A0A1W2PQU0 124 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 ACOD1A6NK06 481 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 FTCDNL1E5RQL4 147 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 RGS11O94810 467 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 P2RX3P56373 397 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 HOXC5Q00444 222 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 AQP6Q13520 282 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 CNN3Q15417 329 aaKnown RBP13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 TMEM41BQ5BJD5 291 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 PRAMEF8Q5VWM4 474 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 PRAMEF7Q5VXH5 474 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 TMEM130Q8N3G9 435 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 CPXM2Q8N436 756 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 LINC01599Q8WXQ3 324 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 TEX37Q96LM6 180 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 ELOVL3Q9HB03 270 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 STEAP1Q9UHE8 339 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 VSTM5A8MXK1 200 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 LILRB5O75023 590 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 TRAPPC6AO75865 159 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 ZNF888P0CJ79 500 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 ECI1P42126 302 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 SRPXP78539 464 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 SEMA3BQ13214 749 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 KIR2DS3Q14952 304 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 FAM71F1Q96KD3 344 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 HIDE1A8MVS5 230 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 CNOT4O95628 575 aaKnown RBP13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 SLC9A3R2Q15599 337 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 RTP2Q5QGT7 225 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 TANGO2Q6ICL3 276 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 OR13C2Q8NGS9 318 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 TMEM40Q8WWA1 233 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 SEC22CQ9BRL7 303 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 C1QTNF3Q9BXJ4 246 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 OR52A5Q9H2C5 316 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 CERS4Q9HA82 394 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 NOX4Q9NPH5 578 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 TPOP07202 933 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 SLC10A3P09131 477 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 CALCBP10092 127 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 ZNF43P17038 809 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 C5AR1P21730 350 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 POLR2HP52434 150 aaKnown RBP13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 PDZK1IP1Q13113 114 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 GPR137CQ8N3F9 429 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 OR10Z1Q8NGY1 313 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 YIPF5Q969M3 257 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 DEFB126Q9BYW3 111 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 ALKBH4Q9NXW9 302 aa13.94□□□□□ -0.18
SMARCA4-207ENST00000541122 A0A1W2PP55 124 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 LRIT2A6NDA9 550 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 I6L893 689 aaPredicted RBP13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 RAD1O60671 282 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 TGM1P22735 817 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 BDH1Q02338 343 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 ACSM1Q08AH1 577 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 RPE65Q16518 533 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 TOR2AQ5JU69 321 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 WDR88Q6ZMY6 472 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 MEX3BQ6ZN04 569 aaKnown RBP13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 MDGA2Q7Z553 956 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 ZNF160Q9HCG1 818 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 ARRDC5A6NEK1 342 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 SIX6O95475 246 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 NME2P22392 152 aa13.93□□□□□ -0.18
SMARCA4-207ENST00000541122 SPOCK1Q08629 439 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms