RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 HPS1Q92902 700 aa23.36■■□□□ 1.33
CHFR-218ENST00000540963 VRK1Q99986 396 aaPredicted RBP23.36■■□□□ 1.33
CHFR-218ENST00000540963 KCNS3Q9BQ31 491 aa23.36■■□□□ 1.33
CHFR-218ENST00000540963 C1orf50Q9BV19 199 aa23.36■■□□□ 1.33
CHFR-218ENST00000540963 MOV10Q9HCE1 1003 aaKnown RBP23.36■■□□□ 1.33
CHFR-218ENST00000540963 RNF103-CHMP3A0A140T963 221 aa23.35■■□□□ 1.33
CHFR-218ENST00000540963 RNASET2O00584 256 aaKnown RBP23.35■■□□□ 1.33
CHFR-218ENST00000540963 KCNJ10P78508 379 aa23.35■■□□□ 1.33
CHFR-218ENST00000540963 CARTPTQ16568 116 aa23.35■■□□□ 1.33
CHFR-218ENST00000540963 C3orf36Q3SXR2 165 aa23.35■■□□□ 1.33
CHFR-218ENST00000540963 ZCCHC23Q6ZST2 131 aa23.35■■□□□ 1.33
CHFR-218ENST00000540963 ZNF317Q96PQ6 595 aaPredicted RBP23.35■■□□□ 1.33
CHFR-218ENST00000540963 SLC38A2Q96QD8 506 aa23.35■■□□□ 1.33
CHFR-218ENST00000540963 SF3B5Q9BWJ5 86 aaKnown RBP23.35■■□□□ 1.33
CHFR-218ENST00000540963 OR51I1Q9H343 314 aa23.35■■□□□ 1.33
CHFR-218ENST00000540963 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.35■■□□□ 1.33
CHFR-218ENST00000540963 BCAS1O75363 584 aaPredicted RBP23.34■■□□□ 1.33
CHFR-218ENST00000540963 CRYAAP02489 173 aa23.34■■□□□ 1.33
CHFR-218ENST00000540963 CLDN8P56748 225 aa23.34■■□□□ 1.33
CHFR-218ENST00000540963 RUNX1T1Q06455 604 aa23.34■■□□□ 1.33
CHFR-218ENST00000540963 MAD2L1Q13257 205 aaPredicted RBP23.34■■□□□ 1.33
CHFR-218ENST00000540963 ZSWIM7Q19AV6 140 aa23.34■■□□□ 1.33
CHFR-218ENST00000540963 UGT2A3Q6UWM9 527 aa23.34■■□□□ 1.33
CHFR-218ENST00000540963 TCP10LQ8TDR4 215 aa23.34■■□□□ 1.33
CHFR-218ENST00000540963 C3orf30Q96M34 536 aa23.34■■□□□ 1.33
CHFR-218ENST00000540963 RAB1BQ9H0U4 201 aa23.34■■□□□ 1.33
CHFR-218ENST00000540963 PLK3Q9H4B4 646 aa23.34■■□□□ 1.33
CHFR-218ENST00000540963 TMED7-TICAM2A0A0A6YYA0 188 aa23.33■■□□□ 1.33
CHFR-218ENST00000540963 IGHV1-18A0A0C4DH31 117 aa23.33■■□□□ 1.33
CHFR-218ENST00000540963 SLU7O95391 586 aaKnown RBP23.33■■□□□ 1.33
CHFR-218ENST00000540963 TACSTD2P09758 323 aa23.33■■□□□ 1.33
CHFR-218ENST00000540963 IMPDH2P12268 514 aa23.33■■□□□ 1.33
CHFR-218ENST00000540963 SERPINB5P36952 375 aa23.33■■□□□ 1.33
CHFR-218ENST00000540963 IDH2P48735 452 aaKnown RBP23.33■■□□□ 1.33
CHFR-218ENST00000540963 IDH3GP51553 393 aaPredicted RBP23.33■■□□□ 1.33
CHFR-218ENST00000540963 POLR2HP52434 150 aaKnown RBP23.33■■□□□ 1.33
CHFR-218ENST00000540963 CHN2P52757 468 aa23.33■■□□□ 1.33
CHFR-218ENST00000540963 OLIG3Q7RTU3 272 aa23.33■■□□□ 1.33
CHFR-218ENST00000540963 CMIPQ8IY22 773 aa23.33■■□□□ 1.33
CHFR-218ENST00000540963 ANKS4BQ8N8V4 417 aa23.33■■□□□ 1.33
CHFR-218ENST00000540963 ROPN1LQ96C74 230 aa23.33■■□□□ 1.33
CHFR-218ENST00000540963 DNAJA3Q96EY1 480 aa23.33■■□□□ 1.33
CHFR-218ENST00000540963 TMEM45AQ9NWC5 275 aa23.33■■□□□ 1.33
CHFR-218ENST00000540963 PRDM4Q9UKN5 801 aa23.33■■□□□ 1.33
CHFR-218ENST00000540963 TMED7Q9Y3B3 224 aa23.33■■□□□ 1.33
CHFR-218ENST00000540963 FAAHO00519 579 aa23.32■■□□□ 1.32
CHFR-218ENST00000540963 STAMBPO95630 424 aa23.32■■□□□ 1.32
CHFR-218ENST00000540963 ADIPOQQ15848 244 aa23.32■■□□□ 1.32
CHFR-218ENST00000540963 PGS1Q32NB8 556 aa23.32■■□□□ 1.32
CHFR-218ENST00000540963 FRRS1Q6ZNA5 592 aa23.32■■□□□ 1.32
CHFR-218ENST00000540963 CLECL1Q8IZS7 167 aa23.32■■□□□ 1.32
CHFR-218ENST00000540963 RIBC1Q8N443 379 aaPredicted RBP23.32■■□□□ 1.32
CHFR-218ENST00000540963 OR8J2Q8NGG1 315 aa23.32■■□□□ 1.32
CHFR-218ENST00000540963 XAGE5Q8WWM1 108 aa23.32■■□□□ 1.32
CHFR-218ENST00000540963 SOX7Q9BT81 388 aa23.32■■□□□ 1.32
CHFR-218ENST00000540963 ASIC5Q9NY37 505 aa23.32■■□□□ 1.32
CHFR-218ENST00000540963 CRNNQ9UBG3 495 aaPredicted RBP23.32■■□□□ 1.32
CHFR-218ENST00000540963 TMEFF2Q9UIK5 374 aaPredicted RBP23.32■■□□□ 1.32
CHFR-218ENST00000540963 OSGIN1Q9UJX0 560 aa23.32■■□□□ 1.32
CHFR-218ENST00000540963 TYROBPO43914 113 aa23.31■■□□□ 1.32
CHFR-218ENST00000540963 ERCC1P07992 297 aaPredicted RBP23.31■■□□□ 1.32
CHFR-218ENST00000540963 OR12D1P0DN82 309 aa23.31■■□□□ 1.32
CHFR-218ENST00000540963 G6PDP11413 515 aa23.31■■□□□ 1.32
CHFR-218ENST00000540963 ETV4P43268 484 aa23.31■■□□□ 1.32
CHFR-218ENST00000540963 SMU1Q2TAY7 513 aa23.31■■□□□ 1.32
CHFR-218ENST00000540963 HIKESHIQ53FT3 197 aa23.31■■□□□ 1.32
CHFR-218ENST00000540963 AAED1Q7RTV5 226 aa23.31■■□□□ 1.32
CHFR-218ENST00000540963 SPATA19Q7Z5L4 167 aa23.31■■□□□ 1.32
CHFR-218ENST00000540963 FAM169BQ8N8A8 192 aa23.31■■□□□ 1.32
CHFR-218ENST00000540963 ZIC4Q8N9L1 334 aa23.31■■□□□ 1.32
CHFR-218ENST00000540963 OR4F15Q8NGB8 312 aa23.31■■□□□ 1.32
CHFR-218ENST00000540963 NEU4Q8WWR8 484 aaPredicted RBP23.31■■□□□ 1.32
CHFR-218ENST00000540963 ZDHHC2Q9UIJ5 367 aa23.31■■□□□ 1.32
CHFR-218ENST00000540963 ARPC4-TTLL3A0A0A6YYG9 625 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 A0A0A6YYJ9 748 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 TMEM72A0PK05 275 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 SLCO1B7G3V0H7 640 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 SNUPNO95149 360 aaKnown RBP23.3■■□□□ 1.32
CHFR-218ENST00000540963 OR4A8P0C604 315 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 CCNA2P20248 432 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 PCMT1P22061 227 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 UQCRC2P22695 453 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 SLC1A3P43003 542 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 PLAURQ03405 335 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 TBRG1Q3YBR2 411 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 OTUD3Q5T2D3 398 aaPredicted RBP23.3■■□□□ 1.32
CHFR-218ENST00000540963 OR4F3Q6IEY1 312 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 CLEC4FQ8N1N0 589 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 LINC01356Q8N9X3 169 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 OR9K2Q8NGE7 335 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 AGR3Q8TD06 166 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 MAGEE2Q8TD90 523 aaPredicted RBP23.3■■□□□ 1.32
CHFR-218ENST00000540963 ZFAND2BQ8WV99 257 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 TUBGCP3Q96CW5 907 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 ZG16BQ96DA0 208 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 ROPN1BQ9BZX4 212 aaPredicted RBP23.3■■□□□ 1.32
CHFR-218ENST00000540963 ROPN1Q9HAT0 212 aaPredicted RBP23.3■■□□□ 1.32
CHFR-218ENST00000540963 NOP53Q9NZM5 478 aaKnown RBP23.3■■□□□ 1.32
CHFR-218ENST00000540963 PCDHB14Q9Y5E9 798 aa23.3■■□□□ 1.32
CHFR-218ENST00000540963 OR6C65A6NJZ3 312 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms