RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ZNF726A6NNF4 738 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 KDM4EB2RXH2 506 aaPredicted RBP4.85□□□□□ -1.63
PROM1-220ENST00000540805 KRBOX1C9JBD0 128 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 ANHXE9PGG2 379 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 EIF1AYO14602 144 aaKnown RBP4.85□□□□□ -1.63
PROM1-220ENST00000540805 KIAA0355O15063 1070 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 HRO43593 1189 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 TLX3O43711 291 aaPredicted RBP4.85□□□□□ -1.63
PROM1-220ENST00000540805 IL3P08700 152 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 ACAA1P09110 424 aaPredicted RBP4.85□□□□□ -1.63
PROM1-220ENST00000540805 ZNF823P16415 610 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 PLA2G5P39877 138 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 SELENOPP49908 381 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 PSMD4P55036 377 aaKnown RBP4.85□□□□□ -1.63
PROM1-220ENST00000540805 GMFBP60983 142 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 ACSM1Q08AH1 577 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 ENPP2Q13822 863 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 GSG1Q2KHT4 349 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 NDUFAF6Q330K2 333 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 Q6ZSR6 202 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 OVCH2Q7RTZ1 564 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 ZNF485Q8NCK3 441 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 OR4F15Q8NGB8 312 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 OR52N1Q8NH53 320 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 RFKQ969G6 155 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 PBX4Q9BYU1 374 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 PLA2G12AQ9BZM1 189 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 ZNF436Q9C0F3 470 aaPredicted RBP4.85□□□□□ -1.63
PROM1-220ENST00000540805 EGLN3Q9H6Z9 239 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 TMEM138Q9NPI0 162 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 CD93Q9NPY3 652 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 DCAF16Q9NXF7 216 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 C5AR2Q9P296 337 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 A4GNTQ9UNA3 340 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 CCL26Q9Y258 94 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.85□□□□□ -1.632e-7■■■■■ 27.8
PROM1-220ENST00000540805 A0A1W2PRQ8 180 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 LINC01553A4QN01 128 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 MFSD2BA6NFX1 497 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 M0R3H8 397 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 SOX1O00570 391 aaPredicted RBP4.85□□□□□ -1.63
PROM1-220ENST00000540805 RNF13O43567 381 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 HCRTR2O43614 444 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 KLHL18O94889 574 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 PAPLNO95428 1278 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 WDPCPO95876 746 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 CLUP10909 449 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 NPR2P20594 1047 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 DRD5P21918 477 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 GALP22466 123 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 EPHA4P54764 986 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 RAG2P55895 527 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 RPS15P62841 145 aaKnown RBP4.85□□□□□ -1.63
PROM1-220ENST00000540805 EFNB1P98172 346 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 NSDHLQ15738 373 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 TMEM44Q2T9K0 475 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 ASTLQ6HA08 431 aaPredicted RBP4.85□□□□□ -1.63
PROM1-220ENST00000540805 CDPF1Q6NVV7 123 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 C3P1Q6ZMU1 363 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 KLBQ86Z14 1044 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 POGLUT1Q8NBL1 392 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 OR10H4Q8NGA5 316 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 SP7Q8TDD2 431 aaPredicted RBP4.85□□□□□ -1.63
PROM1-220ENST00000540805 NEURL3Q96EH8 262 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 ZDHHC12Q96GR4 267 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 FAM83CQ9BQN1 747 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 C7orf50Q9BRJ6 194 aaKnown RBP4.85□□□□□ -1.63
PROM1-220ENST00000540805 RAB11FIP5Q9BXF6 653 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 METTL17Q9H7H0 456 aaPredicted RBP4.85□□□□□ -1.63
PROM1-220ENST00000540805 NIT2Q9NQR4 276 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 MRPL15Q9P015 296 aaKnown RBP4.85□□□□□ -1.63
PROM1-220ENST00000540805 PISDQ9UG56 409 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 MBD1Q9UIS9 605 aaPredicted RBP4.85□□□□□ -1.63
PROM1-220ENST00000540805 ZNF593O00488 134 aaPredicted RBP4.85□□□□□ -1.63
PROM1-220ENST00000540805 F10P00742 488 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 OPN1LWP04000 364 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 CD3GP09693 182 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 ZNF806P0C7X5 589 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 ADRB3P13945 408 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 PVRP15151 417 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 UGT2B7P16662 529 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 GJA4P35212 333 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 DUSP3P51452 185 aaPredicted RBP4.85□□□□□ -1.63
PROM1-220ENST00000540805 CCR6P51684 374 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 SRYQ05066 204 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 ALKBH1Q13686 389 aaKnown RBP4.85□□□□□ -1.63
PROM1-220ENST00000540805 PRSS53Q2L4Q9 553 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 SLC36A2Q495M3 483 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 FAM78AQ5JUQ0 283 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 ENTPD8Q5MY95 495 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 KIAA1161Q6NSJ0 714 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 RFLNAQ6ZTI6 216 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 ABHD13Q7L211 337 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 SIAH3Q8IW03 269 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 SLITRK4Q8IW52 837 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 OR4C6Q8NH72 309 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 TRMT10AQ8TBZ6 339 aaKnown RBP4.85□□□□□ -1.63
PROM1-220ENST00000540805 HAVCR2Q8TDQ0 301 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 SLC25A28Q96A46 364 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 RHOVQ96L33 236 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms