RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 FABP4P15090 132 aa8.75□□□□□ -1.01
CLIP1-214ENST00000540539 ZNF84P51523 738 aa8.75□□□□□ -1.01
CLIP1-214ENST00000540539 NRG3P56975 720 aa8.75□□□□□ -1.01
CLIP1-214ENST00000540539 LAMTOR4Q0VGL1 99 aa8.75□□□□□ -1.01
CLIP1-214ENST00000540539 ZNF750Q32MQ0 723 aa8.75□□□□□ -1.01
CLIP1-214ENST00000540539 AWAT1Q58HT5 328 aa8.75□□□□□ -1.01
CLIP1-214ENST00000540539 BEX5Q5H9J7 111 aa8.75□□□□□ -1.01
CLIP1-214ENST00000540539 TPGS1Q6ZTW0 290 aa8.75□□□□□ -1.01
CLIP1-214ENST00000540539 GPRIN1Q7Z2K8 1008 aa8.75□□□□□ -1.01
CLIP1-214ENST00000540539 MMP21Q8N119 569 aa8.75□□□□□ -1.01
CLIP1-214ENST00000540539 NAXEQ8NCW5 288 aa8.75□□□□□ -1.01
CLIP1-214ENST00000540539 OR2AK2Q8NG84 335 aa8.75□□□□□ -1.01
CLIP1-214ENST00000540539 OR4F15Q8NGB8 312 aa8.75□□□□□ -1.01
CLIP1-214ENST00000540539 KCTD12Q96CX2 325 aaKnown RBP8.75□□□□□ -1.01
CLIP1-214ENST00000540539 TMEM176AQ96HP8 235 aa8.75□□□□□ -1.01
CLIP1-214ENST00000540539 DIRC2Q96SL1 478 aa8.75□□□□□ -1.01
CLIP1-214ENST00000540539 BHLHE41Q9C0J9 482 aaPredicted RBP8.75□□□□□ -1.01
CLIP1-214ENST00000540539 SEPSECSQ9HD40 501 aaKnown RBP8.75□□□□□ -1.01
CLIP1-214ENST00000540539 PRODH2Q9UF12 536 aa8.75□□□□□ -1.01
CLIP1-214ENST00000540539 FBXL4Q9UKA2 621 aa8.75□□□□□ -1.01
CLIP1-214ENST00000540539 TIMM10BQ9Y5J6 103 aa8.75□□□□□ -1.01
CLIP1-214ENST00000540539 PPP1R2P9O14990 202 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 ITGA10O75578 1167 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 F13BP05160 661 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 EDN1P05305 212 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 SNRNP70P08621 437 aaKnown RBP8.74□□□□□ -1.01
CLIP1-214ENST00000540539 CTSHP09668 335 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 C1SP09871 688 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 VSIG10L2P0DP72 767 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 CELP19835 753 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 FDXRP22570 491 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 S100A7P31151 101 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 BMI1P35226 326 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 KIR3DL1P43629 444 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 OR10A3P58181 314 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 SHC2P98077 582 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 IL10RAQ13651 578 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 CAPSQ13938 189 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 ABRAXAS2Q15018 415 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 CSRP2Q16527 193 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 LINC00303Q3SY05 128 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 NCR3LG1Q68D85 454 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 TSSK4Q6SA08 328 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 IL34Q6ZMJ4 242 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 ESPNLQ6ZVH7 1005 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 JAGN1Q8N5M9 183 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 PNLDC1Q8NA58 520 aaKnown RBP8.74□□□□□ -1.01
CLIP1-214ENST00000540539 OR10R2Q8NGX6 335 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 SMIM4Q8WVI0 70 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 METTL21AQ8WXB1 218 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 RSC1A1Q92681 617 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 GPR21Q99679 349 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 BCO2Q9BYV7 579 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 FN3KRPQ9HA64 309 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 RHOFQ9HBH0 211 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 TSPAN16Q9UKR8 245 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 FZD10Q9ULW2 581 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 AKT3Q9Y243 479 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 DSPPQ9NZW4 1301 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 SMIM35A0A1B0GVV1 85 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 TMEM238C9JI98 176 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 C9JQL5 133 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 FAM227AF5H4B4 570 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 J3QW42 95 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 SURF4O15260 269 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 OGG1O15527 345 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 RNF13O43567 381 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 CILPO75339 1184 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 GASTP01350 101 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 ARG1P05089 322 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 OR1E2P47887 323 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 CCR8P51685 355 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 GAS1P54826 345 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 HEPACAMQ14CZ8 416 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 CERS6Q6ZMG9 384 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 CXXC5Q7LFL8 322 aaKnown RBP8.74□□□□□ -1.01
CLIP1-214ENST00000540539 SLC16A14Q7RTX9 510 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 TMEM130Q8N3G9 435 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 NPWQ8N729 165 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 HSD17B11Q8NBQ5 300 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 RNF149Q8NC42 400 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 CLEC4CQ8WTT0 213 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 OIT3Q8WWZ8 545 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 MRGPRX3Q96LB0 322 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 ZNF382Q96SR6 550 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 INSM2Q96T92 566 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-214ENST00000540539 C1QTNF3Q9BXJ4 246 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 TRPV4Q9HBA0 871 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 TMEM100Q9NV29 134 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 FAM120CQ9NX05 1096 aaKnown RBP8.74□□□□□ -1.01
CLIP1-214ENST00000540539 ELOVL2Q9NXB9 296 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 NDOR1Q9UHB4 597 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 MAP4K5Q9Y4K4 846 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 CCL27Q9Y4X3 112 aa8.74□□□□□ -1.01
CLIP1-214ENST00000540539 TCRBV21S2A2A0A5A6 115 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 UBE2QL1A1L167 161 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 ZNF587BE7ETH6 402 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 J3KTA2 159 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 GSTZ1O43708 216 aaPredicted RBP8.73□□□□□ -1.01
CLIP1-214ENST00000540539 BPNT1O95861 308 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms