RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 SLC25A15Q9Y619 301 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 YLPM1P49750 1951 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 CSPG4Q6UVK1 2322 aa11.55□□□□□ -0.56
SEMA4D-223ENST00000540475 ZC3H12DA2A288 527 aaKnown RBP11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 FZD7O75084 574 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 NPIPB7O75200 414 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 MRPL33O75394 65 aaKnown RBP11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 TGDSO95455 350 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 CD8AP01732 235 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 UQCRBP14927 111 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 CRISP3P54108 245 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 ATP5J2P56134 94 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 OR2B6P58173 313 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 DSTNP60981 165 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 LIN52Q52LA3 116 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 AGBL2Q5U5Z8 902 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 NXNQ6DKJ4 435 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 WBP2NLQ6ICG8 309 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 OR7E24Q6IFN5 339 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 ZNF836Q6ZNA1 936 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 VRK2Q86Y07 508 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 MIER2Q8N344 545 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 ZIC4Q8N9L1 334 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 KBTBD8Q8NFY9 601 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 OR9I1Q8NGQ6 314 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 NEUROG1Q92886 237 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 VPS33AQ96AX1 596 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 TRAF4Q9BUZ4 470 aaPredicted RBP11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 SLC52A3Q9NQ40 469 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 TMEM45AQ9NWC5 275 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 PARPBPQ9NWS1 579 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 ASB6Q9NWX5 421 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 DCTN4Q9UJW0 460 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 SLC9A8Q9Y2E8 581 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 PCDHB14Q9Y5E9 798 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 MAGED1Q9Y5V3 778 aaPredicted RBP11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 USH1CQ9Y6N9 552 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 ABCA2Q9BZC7 2435 aa11.54□□□□□ -0.56
SEMA4D-223ENST00000540475 CUBNO60494 3623 aa11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 LIPT2A6NK58 231 aa11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 CLOCKO15516 846 aa11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 ITGA5P08648 1049 aa11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 CRATP43155 626 aa11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 P2RY4P51582 365 aa11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 FADDQ13158 208 aa11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 RGNQ15493 299 aa11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 GTDC1Q4AE62 458 aa11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 LRIF1Q5T3J3 769 aa11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 Q71RC1 249 aaPredicted RBP11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 FUNDC1Q8IVP5 155 aa11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 CLIP4Q8N3C7 705 aa11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 WDR31Q8NA23 367 aa11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 C1orf162Q8NEQ5 155 aaPredicted RBP11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 TRMT61AQ96FX7 289 aaKnown RBP11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 TMEM19Q96HH6 336 aa11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 SPATA9Q9BWV2 254 aa11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 A4GALTQ9NPC4 353 aa11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 CISD1Q9NZ45 108 aaKnown RBP11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 MGAT4BQ9UQ53 548 aa11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 ZNF443Q9Y2A4 671 aaPredicted RBP11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 IFT52Q9Y366 437 aa11.53□□□□□ -0.56
SEMA4D-223ENST00000540475 HIVEP2P31629 2446 aa11.52□□□□□ -0.56
SEMA4D-223ENST00000540475 A0A096LPI6 279 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 AQP7P3A6NL99 342 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 A8MVM7 634 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 TMEM229AB2RXF0 380 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 CLIC1O00299 241 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 ANP32DO95626 131 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 IGHV3-9P01782 118 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 BCHEP06276 602 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 GPIP06744 558 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 GKN3PP0CG01 181 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 CCNA2P20248 432 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 CXCR1P25024 350 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 PTAFRP25105 342 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 IDUAP35475 653 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 FOXG1P55316 489 aaPredicted RBP11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 IRX1P78414 480 aaPredicted RBP11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 FAPQ12884 760 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 TNK1Q13470 666 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 CEACAM7Q14002 265 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 LARS2Q15031 903 aaKnown RBP11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 STK11Q15831 433 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 ALKBH2Q6NS38 261 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 BLOC1S3Q6QNY0 202 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 C17orf78Q8N4C9 275 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 TMEM99Q8N816 258 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 AURKBQ96GD4 344 aaPredicted RBP11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 CCDC28BQ9BUN5 200 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 RSPO3Q9BXY4 272 aaPredicted RBP11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 SLC7A10Q9NS82 523 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 ZNF232Q9UNY5 417 aa11.52□□□□□ -0.57
SEMA4D-223ENST00000540475 TRBV5-3A0A0A0MS03 114 aa11.51□□□□□ -0.57
SEMA4D-223ENST00000540475 A0A1W2PP18 115 aa11.51□□□□□ -0.57
SEMA4D-223ENST00000540475 FTCDNL1E5RQL4 147 aa11.51□□□□□ -0.57
SEMA4D-223ENST00000540475 ABCD4O14678 606 aa11.51□□□□□ -0.57
SEMA4D-223ENST00000540475 RAD51DO75771 328 aa11.51□□□□□ -0.57
SEMA4D-223ENST00000540475 VAMP5O95183 116 aa11.51□□□□□ -0.57
SEMA4D-223ENST00000540475 PRG2P13727 222 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms