RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 ZNF385CQ66K41 422 aaPredicted RBP9.29□□□□□ -0.92
SPARC-209ENST00000539687 PWWP2BQ6NUJ5 590 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 PAPD4Q6PIY7 484 aaKnown RBP9.29□□□□□ -0.92
SPARC-209ENST00000539687 CD200R1LQ6Q8B3 271 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 TMEM205Q6UW68 189 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 PAMR1Q6UXH9 720 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 THSD4Q6ZMP0 1018 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 MAMDC2Q7Z304 686 aaPredicted RBP9.29□□□□□ -0.92
SPARC-209ENST00000539687 GRINAQ7Z429 371 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 NANOGNBQ7Z5D8 188 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 JAZF1Q86VZ6 243 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 PRSS58Q8IYP2 241 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 DND1Q8IYX4 353 aaKnown RBP9.29□□□□□ -0.92
SPARC-209ENST00000539687 C10orf53Q8N6V4 93 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 ZNF321PQ8N8H1 164 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 OR52E2Q8NGJ4 325 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 OR51G2Q8NGK0 314 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 OR2T27Q8NH04 317 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 B4GALNT2Q8NHY0 566 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 STK35Q8TDR2 534 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 ST8SIA1Q92185 356 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 NACC2Q96BF6 587 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 SNX18Q96RF0 628 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 CNN2Q99439 309 aaKnown RBP9.29□□□□□ -0.92
SPARC-209ENST00000539687 TEAD3Q99594 435 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 CRB3Q9BUF7 120 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 ALG8Q9BVK2 526 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 C6orf62Q9GZU0 229 aaPredicted RBP9.29□□□□□ -0.92
SPARC-209ENST00000539687 MMP25Q9NPA2 562 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 SLC22A11Q9NSA0 550 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 BABAM2Q9NXR7 383 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 NPFFR2Q9Y5X5 522 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 USP34Q70CQ2 3546 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 ARPC4-TTLL3A0A0A6YYG9 625 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 TMEM221A6NGB7 291 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 C12orf71A8MTZ7 269 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 B4E171 279 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 FAM47E-STBD1D6RA91 191 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 M0R296 226 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 MEN1O00255 615 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 SOCS6O14544 535 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 KHNYNO15037 678 aaKnown RBP9.28□□□□□ -0.92
SPARC-209ENST00000539687 FADS1O60427 444 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 SNX4O95219 450 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 NTN1O95631 604 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 LDOC1O95751 146 aaPredicted RBP9.28□□□□□ -0.92
SPARC-209ENST00000539687 NUDT14O95848 222 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 SERPINA3P01011 423 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 PDGFBP01127 241 aaPredicted RBP9.28□□□□□ -0.92
SPARC-209ENST00000539687 ADRA2AP08913 450 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 ASAH2BP0C7U1 165 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 ACP1P24666 158 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 TACR3P29371 465 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 SDHAP31040 664 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 TSPAN7P41732 249 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 DLX5P56178 289 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 MC2RQ01718 297 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 ZNF117Q03924 483 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 ZFP36L1Q07352 338 aaKnown RBP9.28□□□□□ -0.92
SPARC-209ENST00000539687 EXT1Q16394 746 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.28□□□□□ -0.92
SPARC-209ENST00000539687 NDUFAF6Q330K2 333 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 ALG10Q5BKT4 473 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 SLC35F1Q5T1Q4 408 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 OR2G6Q5TZ20 316 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 SYS1Q8N2H4 156 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 GATSQ8NAP1 163 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 ZNF485Q8NCK3 441 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 ZBTB44Q8NCP5 570 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 NFAM1Q8NET5 270 aaPredicted RBP9.28□□□□□ -0.92
SPARC-209ENST00000539687 ATP6V1C2Q8NEY4 427 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 OR10H4Q8NGA5 316 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 OR4F15Q8NGB8 312 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 OR5M3Q8NGP4 307 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 SPRYD4Q8WW59 207 aaPredicted RBP9.28□□□□□ -0.92
SPARC-209ENST00000539687 GATAD2BQ8WXI9 593 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 KISS1RQ969F8 398 aaPredicted RBP9.28□□□□□ -0.92
SPARC-209ENST00000539687 C1GALT1C1Q96EU7 318 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 CTRCQ99895 268 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 ZPBPQ9BS86 351 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 CDADC1Q9BWV3 514 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 OR51V1Q9H2C8 321 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 TXNL4BQ9NX01 149 aaKnown RBP9.28□□□□□ -0.92
SPARC-209ENST00000539687 IL20RAQ9UHF4 553 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 ADAM30Q9UKF2 790 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 UGT2A1Q9Y4X1 527 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 IER3IP1Q9Y5U9 82 aa9.28□□□□□ -0.92
SPARC-209ENST00000539687 GOLGA4Q13439 2230 aaKnown RBP9.28□□□□□ -0.92
SPARC-209ENST00000539687 IGKV1D-42A0A075B6H8 117 aa9.27□□□□□ -0.93
SPARC-209ENST00000539687 LOC102723996A0A087X1L8 192 aa9.27□□□□□ -0.93
SPARC-209ENST00000539687 CCDC182A6NF36 153 aa9.27□□□□□ -0.93
SPARC-209ENST00000539687 ANKUB1A6NFN9 424 aa9.27□□□□□ -0.93
SPARC-209ENST00000539687 FAM183AA6NL82 134 aa9.27□□□□□ -0.93
SPARC-209ENST00000539687 HSPB2A8KAH6 182 aa9.27□□□□□ -0.93
SPARC-209ENST00000539687 A8MVM7 634 aa9.27□□□□□ -0.93
SPARC-209ENST00000539687 PHYHO14832 338 aa9.27□□□□□ -0.93
SPARC-209ENST00000539687 PLD2O14939 933 aa9.27□□□□□ -0.93
SPARC-209ENST00000539687 TMEM127O75204 238 aa9.27□□□□□ -0.93
SPARC-209ENST00000539687 AHSA1O95433 338 aa9.27□□□□□ -0.93
SPARC-209ENST00000539687 SLC2A10O95528 541 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms