RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 LINC00854A0A1B0GVQ3 168 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 UTS2O95399 124 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 TRAPPC2P0DI81 140 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 TRAPPC2BP0DI82 140 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 APEHP13798 732 aaKnown RBP16.38■□□□□ 0.21
GNE-204ENST00000539208 THBS2P35442 1172 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 P2RY14Q15391 338 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 IDNKQ5T6J7 187 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 TRIQKQ629K1 86 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 LRRC28Q86X40 367 aaPredicted RBP16.38■□□□□ 0.21
GNE-204ENST00000539208 SLC35F2Q8IXU6 374 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 ZNF321PQ8N8H1 164 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 C19orf18Q8NEA5 215 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 GHSRQ92847 366 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 HSPA12BQ96MM6 686 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 MOV10Q9HCE1 1003 aaKnown RBP16.38■□□□□ 0.21
GNE-204ENST00000539208 CYSLTR2Q9NS75 346 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 SEMA5BQ9P283 1151 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 HIF3AQ9Y2N7 669 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 IGHV1OR21-1A0A087WYE8 117 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 MEIOCA2RUB1 952 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 ZNF264O43296 627 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 NUDT21O43809 227 aaKnown RBP16.38■□□□□ 0.21
GNE-204ENST00000539208 DDAH2O95865 285 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 ELK1P19419 428 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 GRK6P43250 576 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 OR1D4P47884 311 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 GBX2P52951 348 aaPredicted RBP16.38■□□□□ 0.21
GNE-204ENST00000539208 DCAF7P61962 342 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 ACSM3Q53FZ2 586 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 RPTNQ6XPR3 784 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 PRR23CQ6ZRP0 262 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 OR6F1Q8NGZ6 308 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 PHOSPHO1Q8TCT1 267 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 ZNF721Q8TF20 911 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 ADIPOR1Q96A54 375 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 MRPL48Q96GC5 212 aaKnown RBP16.38■□□□□ 0.21
GNE-204ENST00000539208 C12orf10Q9HB07 376 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 SLC6A5Q9Y345 797 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 CLCA3PQ9Y6N3 262 aa16.38■□□□□ 0.21
GNE-204ENST00000539208 TRAV1-2A0A0B4J238 106 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 B4DXG7 233 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 SDC3O75056 442 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 SPI1P17947 270 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 ALAS2P22557 587 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 ACVR1BP36896 505 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 OR1D5P58170 312 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 STARD6P59095 220 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 ELAVL1Q15717 326 aaKnown RBP16.37■□□□□ 0.21
GNE-204ENST00000539208 ZNF74Q16587 644 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 CCDC58Q4VC31 144 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 SFXN4Q6P4A7 337 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 TRILQ7L0X0 811 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 PLXDC1Q8IUK5 500 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 SMIM19Q96E16 107 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 PELI1Q96FA3 418 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 NMNAT3Q96T66 252 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 KCNJ15Q99712 375 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 YIPF2Q9BWQ6 316 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.37■□□□□ 0.21
GNE-204ENST00000539208 NPFFR2Q9Y5X5 522 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 PCDH15Q96QU1 1955 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 A0A0G2JK05 382 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 OR6C68A6NDL8 312 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 IMPA2O14732 288 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 OIP5O43482 229 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 KIR2DL3P43628 341 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 ARL4DP49703 201 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 SIRPAP78324 504 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 HSF2Q03933 536 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 CDK5R1Q15078 307 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 RPL22L1Q6P5R6 122 aaKnown RBP16.37■□□□□ 0.21
GNE-204ENST00000539208 APOOLQ6UXV4 268 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 D2HGDHQ8N465 521 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 RFLNBQ8N5W9 214 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 GATSQ8NAP1 163 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 MFRPQ9BY79 579 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 OR8D2Q9GZM6 311 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 LAT2Q9GZY6 243 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 MMP28Q9H239 520 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 B3GAT2Q9NPZ5 323 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 MALT1Q9UDY8 824 aa16.37■□□□□ 0.21
GNE-204ENST00000539208 HEATR5AQ86XA9 2040 aa16.36■□□□□ 0.21
GNE-204ENST00000539208 TCRBV16S1A1N1A0A5B0 115 aa16.36■□□□□ 0.21
GNE-204ENST00000539208 HMX3A6NHT5 357 aa16.36■□□□□ 0.21
GNE-204ENST00000539208 FAM25AB3EWG3 89 aa16.36■□□□□ 0.21
GNE-204ENST00000539208 FAM25CB3EWG5 89 aa16.36■□□□□ 0.21
GNE-204ENST00000539208 FAM25GB3EWG6 89 aa16.36■□□□□ 0.21
GNE-204ENST00000539208 PRKNO60260 465 aaPredicted RBP16.36■□□□□ 0.21
GNE-204ENST00000539208 MAP2K3P46734 347 aa16.36■□□□□ 0.21
GNE-204ENST00000539208 HCCSP53701 268 aa16.36■□□□□ 0.21
GNE-204ENST00000539208 ERVK-25P63136 954 aa16.36■□□□□ 0.21
GNE-204ENST00000539208 TP53I3Q53FA7 332 aa16.36■□□□□ 0.21
GNE-204ENST00000539208 FAM27D1Q5T7N8 215 aa16.36■□□□□ 0.21
GNE-204ENST00000539208 MZT2BQ6NZ67 158 aa16.36■□□□□ 0.21
GNE-204ENST00000539208 CBLN3Q6UW01 205 aa16.36■□□□□ 0.21
GNE-204ENST00000539208 NCCRP1Q6ZVX7 275 aaPredicted RBP16.36■□□□□ 0.21
GNE-204ENST00000539208 LRRC75AQ8NAA5 344 aa16.36■□□□□ 0.21
GNE-204ENST00000539208 DUSP18Q8NEJ0 188 aa16.36■□□□□ 0.21
GNE-204ENST00000539208 OR1L3Q8NH93 324 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms