RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 TRIM61Q5EBN2 209 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 PRSS41Q7RTY9 318 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 LSMEM1Q8N8F7 131 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 CNOT9Q92600 299 aaKnown RBP13.37□□□□□ -0.27
CDCA3-207ENST00000538862 AKAP1Q92667 903 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDCA3-207ENST00000538862 ANKRD9Q96BM1 317 aaPredicted RBP13.37□□□□□ -0.27
CDCA3-207ENST00000538862 TNFRSF13CQ96RJ3 184 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 FLRT3Q9NZU0 649 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 A0A1B0GWA3 101 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 LNP1A1A4G5 178 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 ALX3O95076 343 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 MRPL3P09001 348 aaKnown RBP13.37□□□□□ -0.27
CDCA3-207ENST00000538862 SLC35E2P0CK97 266 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 AGFG1P52594 562 aaKnown RBP13.37□□□□□ -0.27
CDCA3-207ENST00000538862 RAB38P57729 211 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 OR10A3P58181 314 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 YPEL5P62699 121 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 LINC00114Q6XXX2 140 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 C17orf47Q8NEP4 570 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 OR5T3Q8NGG3 340 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 TRMT10AQ8TBZ6 339 aaKnown RBP13.37□□□□□ -0.27
CDCA3-207ENST00000538862 GRHL3Q8TE85 626 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 LMF2Q9BU23 707 aaKnown RBP13.37□□□□□ -0.27
CDCA3-207ENST00000538862 EVA1BQ9NVM1 165 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 WDR70Q9NW82 654 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 SLCO1B1Q9Y6L6 691 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 ARHGEF17Q96PE2 2063 aaPredicted RBP13.37□□□□□ -0.27
CDCA3-207ENST00000538862 ASCC3Q8N3C0 2202 aaKnown RBP13.36□□□□□ -0.27
CDCA3-207ENST00000538862 A0A0J9YY10 115 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 KHNYNO15037 678 aaKnown RBP13.36□□□□□ -0.27
CDCA3-207ENST00000538862 OGG1O15527 345 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 LANCL1O43813 399 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 CBX7O95931 251 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 CFIP05156 583 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 CLUP10909 449 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 RAB3BP20337 219 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 ACAA2P42765 397 aaKnown RBP13.36□□□□□ -0.27
CDCA3-207ENST00000538862 LSSP48449 732 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 FHL1Q13642 323 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 FAM27D1Q5T7N8 215 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 FCRLBQ6BAA4 426 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 ZAR1Q86SH2 424 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 GHSRQ92847 366 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 MFRPQ9BY79 579 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 ABCG5Q9H222 651 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 ZCCHC4Q9H5U6 513 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 MCCC2Q9HCC0 563 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 POT1Q9NUX5 634 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 MCUBQ9NWR8 336 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 ST6GALNAC2Q9UJ37 374 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 CDV3Q9UKY7 258 aaKnown RBP13.36□□□□□ -0.27
CDCA3-207ENST00000538862 CACNG2Q9Y698 323 aa13.36□□□□□ -0.27
CDCA3-207ENST00000538862 SLC9B1P1A6NJY1 282 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 AGRPO00253 132 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 FZD7O75084 574 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 SEMA4FO95754 770 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 PAHP00439 452 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 CD1AP06126 327 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 TFPIP10646 304 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 PVRP15151 417 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 FOSL1P15407 271 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 PYCR1P32322 319 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 ACVR1BP36896 505 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 ILF3Q12906 894 aaKnown RBP eCLIP13.35□□□□□ -0.27
CDCA3-207ENST00000538862 MRPL28Q13084 256 aaKnown RBP13.35□□□□□ -0.27
CDCA3-207ENST00000538862 ALG11Q2TAA5 492 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 IL20RBQ6UXL0 311 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 ZNF550Q7Z398 422 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 GPR135Q8IZ08 494 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 SYS1Q8N2H4 156 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 CSNK1A1LQ8N752 337 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 CYB561A3Q8NBI2 242 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 OR52R1Q8NGF1 315 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 OR5J2Q8NH18 312 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 EDEM2Q9BV94 578 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.35□□□□□ -0.27
CDCA3-207ENST00000538862 DNAJB12Q9NXW2 375 aaKnown RBP13.35□□□□□ -0.27
CDCA3-207ENST00000538862 ABRACLQ9P1F3 81 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 METTL12A8MUP2 240 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 DHFRP00374 187 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 OR2T7P0C7T2 308 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 ACTA2P62736 377 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 ACTG2P63267 376 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 PSG6Q00889 435 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 GGTLC2Q14390 218 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 ZNHIT3Q15649 155 aaPredicted RBP13.35□□□□□ -0.27
CDCA3-207ENST00000538862 ALG10BQ5I7T1 473 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 ASB18Q6ZVZ8 466 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 POMGNT2Q8NAT1 580 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 OR2T27Q8NH04 317 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 PTCHD1Q96NR3 888 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 GFM1Q96RP9 751 aaKnown RBP13.35□□□□□ -0.27
CDCA3-207ENST00000538862 ABHD1Q96SE0 405 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 NDEL1Q9GZM8 345 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 GALNT9Q9HCQ5 603 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 HRASLS2Q9NWW9 162 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 CPNE7Q9UBL6 633 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 CHRNA9Q9UGM1 479 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 FBXL4Q9UKA2 621 aa13.35□□□□□ -0.27
CDCA3-207ENST00000538862 CACNA1AO00555 2505 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms