RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 ACTA2P62736 377 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 ACTG2P63267 376 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 SELENBP1Q13228 472 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 CCDC85BQ15834 202 aaPredicted RBP8.5□□□□□ -1.05
UBE3B-207ENST00000537063 TPRA1Q86W33 373 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 C17orf47Q8NEP4 570 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 OR5J2Q8NH18 312 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 KCTD12Q96CX2 325 aaKnown RBP8.5□□□□□ -1.05
UBE3B-207ENST00000537063 NUDT9Q9BW91 350 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 MFRPQ9BY79 579 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 MRTO4Q9UKD2 239 aaKnown RBP8.5□□□□□ -1.05
UBE3B-207ENST00000537063 ADAM18Q9Y3Q7 739 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 A0A0G2JK05 382 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 A0A1B0GX78 115 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 OR6C76A6NM76 312 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 LRRN3E7EW58 273 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 SCDO00767 359 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 SNPHO15079 494 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 TOX3O15405 576 aaPredicted RBP8.5□□□□□ -1.05
UBE3B-207ENST00000537063 DYRK3O43781 588 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 NCR1O76036 304 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 SLC25A1P53007 311 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 OR12D2P58182 307 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 SCN1BQ07699 218 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 SQSTM1Q13501 440 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 HBMQ6B0K9 141 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 CBLN3Q6UW01 205 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 KANSL1Q7Z3B3 1105 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 CELF2-AS1Q8N7Q2 184 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 OR4K13Q8NH42 304 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 ART5Q96L15 291 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 LRRN3Q9H3W5 708 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 ZNF304Q9HCX3 659 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 MMP25Q9NPA2 562 aa8.5□□□□□ -1.05
UBE3B-207ENST00000537063 DHCR7Q9UBM7 475 aaKnown RBP8.5□□□□□ -1.05
UBE3B-207ENST00000537063 ELOA3DA6NLF2 546 aaPredicted RBP8.49□□□□□ -1.05
UBE3B-207ENST00000537063 SLC19A2O60779 497 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 GYPBP06028 91 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 SPI1P17947 270 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 CASP3P42574 277 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 SLC6A8P48029 635 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 ELOA3BQ3SY89 546 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 WDR45BQ5MNZ6 344 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 LINC01590Q5TEZ4 76 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 MZT2AQ6P582 158 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 CNIH2Q6PI25 160 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 NRARPQ7Z6K4 114 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 FAM98AQ8NCA5 519 aaKnown RBP8.49□□□□□ -1.05
UBE3B-207ENST00000537063 ELOA3Q8NG57 546 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 ZNRF4Q8WWF5 429 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 TGIF2Q9GZN2 237 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 ABCA7Q8IZY2 2146 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 SMIM30A4D0T7 59 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 OR6C68A6NDL8 312 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 ANKRD61A6NGH8 418 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 GNB5O14775 395 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 HPGDSO60760 199 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 ICOSLGO75144 302 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 ZNF684Q5T5D7 378 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 COX15Q7KZN9 410 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 EGFL6Q8IUX8 553 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 SLC35F2Q8IXU6 374 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 UBQLNLQ8IYU4 475 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 PLPP5Q8NEB5 264 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 MOSPD2Q8NHP6 518 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 ABHD4Q8TB40 342 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 ZPLD1Q8TCW7 415 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 HPS1Q92902 700 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 TTYH2Q9BSA4 534 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 RTN4RQ9BZR6 473 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 OR8D2Q9GZM6 311 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 WWTR1Q9GZV5 400 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.49□□□□□ -1.05
UBE3B-207ENST00000537063 TIGARQ9NQ88 270 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 CLCA3PQ9Y6N3 262 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 IGLV3-12A0A075B6K2 115 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 A0A1W2PPC1 479 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 ALG1L2C9J202 215 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 ADAM10O14672 748 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 PRKNO60260 465 aaPredicted RBP8.49□□□□□ -1.05
UBE3B-207ENST00000537063 PNLIPP16233 465 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 AZGP1P25311 298 aaKnown RBP8.49□□□□□ -1.05
UBE3B-207ENST00000537063 ZNF117Q03924 483 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 HSF2Q03933 536 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 LGALS3BPQ08380 585 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 CDK5R1Q15078 307 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 CCDC58Q4VC31 144 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 AGAP6Q5VW22 663 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 ARL9Q6T311 187 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 TRILQ7L0X0 811 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 MS4A15Q8N5U1 240 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 GATSQ8NAP1 163 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 OR1N1Q8NGS0 311 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 PHOSPHO1Q8TCT1 267 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 SMIM19Q96E16 107 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 ZMYND19Q96E35 227 aaPredicted RBP8.49□□□□□ -1.05
UBE3B-207ENST00000537063 AGAP4Q96P64 663 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 KLHDC3Q9BQ90 382 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 VN1R1Q9GZP7 353 aa8.49□□□□□ -1.05
UBE3B-207ENST00000537063 ZCCHC4Q9H5U6 513 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms