RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 WDR60Q8WVS4 1066 aa17.28■□□□□ 0.36
TNFRSF1B-204ENST00000536782 TEX37Q96LM6 180 aa17.28■□□□□ 0.36
TNFRSF1B-204ENST00000536782 C1QTNF6Q9BXI9 259 aa17.28■□□□□ 0.36
TNFRSF1B-204ENST00000536782 PNPOQ9NVS9 261 aa17.28■□□□□ 0.36
TNFRSF1B-204ENST00000536782 DCTN4Q9UJW0 460 aa17.28■□□□□ 0.36
TNFRSF1B-204ENST00000536782 IGHV4-30-2A0A087WSY4 118 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 CFAP73A6NFT4 308 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 FAAHO00519 579 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 ALDOCP09972 364 aaKnown RBP17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 NR2F1P10589 423 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 TGFBR3Q03167 851 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 LRRC74AQ0VAA2 488 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 C9orf135Q5VTT2 229 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 HMBOX1Q6NT76 420 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 ZNF544Q6NX49 715 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 CLEC2AQ6UVW9 174 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 B3GLCTQ6Y288 498 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 ZNF621Q6ZSS3 439 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 HIPK1Q86Z02 1210 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 C17orf78Q8N4C9 275 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 WDR31Q8NA23 367 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 C1orf162Q8NEQ5 155 aaPredicted RBP17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 OR10H5Q8NGA6 315 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 OR52E6Q96RD3 313 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 INPP5KQ9BT40 448 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 AMBRA1Q9C0C7 1298 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 KCNK9Q9NPC2 374 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 SLC7A10Q9NS82 523 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 AIG1Q9NVV5 245 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 AMDHD2Q9Y303 409 aa17.27■□□□□ 0.36
TNFRSF1B-204ENST00000536782 FAM234BA2RU67 622 aa17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 A8MV72 311 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 GPRIN2O60269 458 aa17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 IFNA2P01563 188 aa17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 GSNP06396 782 aa17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 PGRP06401 933 aa17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 DBIP07108 87 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 RPS4Y1P22090 263 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 CDKN2CP42773 168 aa17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 EPS8Q12929 822 aa17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 MPP2Q14168 576 aa17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 SLC17A1Q14916 467 aa17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 MRPL2Q5T653 305 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 TSPO2Q5TGU0 170 aa17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 PAQR6Q6TCH4 344 aa17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 SPATA19Q7Z5L4 167 aa17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 ZBTB18Q99592 522 aa17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 CENPHQ9H3R5 247 aa17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 FKRPQ9H9S5 495 aa17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 SLC17A5Q9NRA2 495 aa17.26■□□□□ 0.35
TNFRSF1B-204ENST00000536782 ZC3H12DA2A288 527 aaKnown RBP17.25■□□□□ 0.35
TNFRSF1B-204ENST00000536782 SDHDO14521 159 aa17.25■□□□□ 0.35
TNFRSF1B-204ENST00000536782 GPIP06744 558 aa17.25■□□□□ 0.35
TNFRSF1B-204ENST00000536782 BMP4P12644 408 aa17.25■□□□□ 0.35
TNFRSF1B-204ENST00000536782 IL12AP29459 219 aa17.25■□□□□ 0.35
TNFRSF1B-204ENST00000536782 BST1Q10588 318 aa17.25■□□□□ 0.35
TNFRSF1B-204ENST00000536782 GSTA3Q16772 222 aa17.25■□□□□ 0.35
TNFRSF1B-204ENST00000536782 COX20Q5RI15 118 aa17.25■□□□□ 0.35
TNFRSF1B-204ENST00000536782 OTUD3Q5T2D3 398 aaPredicted RBP17.25■□□□□ 0.35
TNFRSF1B-204ENST00000536782 C1QTNF12Q5T7M4 302 aa17.25■□□□□ 0.35
TNFRSF1B-204ENST00000536782 PODNL1Q6PEZ8 512 aa17.25■□□□□ 0.35
TNFRSF1B-204ENST00000536782 PEX5LQ8IYB4 626 aa17.25■□□□□ 0.35
TNFRSF1B-204ENST00000536782 ZNF440Q8IYI8 595 aa17.25■□□□□ 0.35
TNFRSF1B-204ENST00000536782 PNPT1Q8TCS8 783 aaKnown RBP17.25■□□□□ 0.35
TNFRSF1B-204ENST00000536782 HTRA1Q92743 480 aa17.25■□□□□ 0.35
TNFRSF1B-204ENST00000536782 TMEM45BQ96B21 275 aa17.25■□□□□ 0.35
TNFRSF1B-204ENST00000536782 PAIP2Q9BPZ3 127 aaKnown RBP17.25■□□□□ 0.35
TNFRSF1B-204ENST00000536782 ADAM19Q9H013 955 aa17.25■□□□□ 0.35
TNFRSF1B-204ENST00000536782 ATP23Q9Y6H3 246 aa17.25■□□□□ 0.35
TNFRSF1B-204ENST00000536782 A0A096LNT2 108 aa17.24■□□□□ 0.35
TNFRSF1B-204ENST00000536782 ELOA3DA6NLF2 546 aaPredicted RBP17.24■□□□□ 0.35
TNFRSF1B-204ENST00000536782 H7C417 338 aa17.24■□□□□ 0.35
TNFRSF1B-204ENST00000536782 KRT75O95678 551 aa17.24■□□□□ 0.35
TNFRSF1B-204ENST00000536782 CXCR1P25024 350 aa17.24■□□□□ 0.35
TNFRSF1B-204ENST00000536782 MPGP29372 298 aa17.24■□□□□ 0.35
TNFRSF1B-204ENST00000536782 PRPS1P60891 318 aa17.24■□□□□ 0.35
TNFRSF1B-204ENST00000536782 CHRNB3Q05901 458 aa17.24■□□□□ 0.35
TNFRSF1B-204ENST00000536782 CEACAM7Q14002 265 aa17.24■□□□□ 0.35
TNFRSF1B-204ENST00000536782 ELOA3BQ3SY89 546 aa17.24■□□□□ 0.35
TNFRSF1B-204ENST00000536782 CHRFAM7AQ494W8 412 aa17.24■□□□□ 0.35
TNFRSF1B-204ENST00000536782 LSRQ86X29 649 aaPredicted RBP17.24■□□□□ 0.35
TNFRSF1B-204ENST00000536782 ELOA3Q8NG57 546 aa17.24■□□□□ 0.35
TNFRSF1B-204ENST00000536782 TNFRSF13CQ96RJ3 184 aa17.24■□□□□ 0.35
TNFRSF1B-204ENST00000536782 SF3B5Q9BWJ5 86 aaKnown RBP17.24■□□□□ 0.35
TNFRSF1B-204ENST00000536782 PRDM4Q9UKN5 801 aa17.24■□□□□ 0.35
TNFRSF1B-204ENST00000536782 GPR45Q9Y5Y3 372 aa17.24■□□□□ 0.35
TNFRSF1B-204ENST00000536782 LIPT2A6NK58 231 aa17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 RFXANKO14593 260 aa17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 AKR7A3O95154 331 aa17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 WNT11O96014 354 aa17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 SLC25A16P16260 332 aa17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 APOBEC3AP31941 199 aaPredicted RBP17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 SLC25A3Q00325 362 aa17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 LOXL1Q08397 574 aaPredicted RBP17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 OR7A5Q15622 319 aa17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 TMEM249Q2WGJ8 235 aa17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 BEND6Q5SZJ8 279 aaPredicted RBP17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 KLHL24Q6TFL4 600 aa17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 AAED1Q7RTV5 226 aa17.23■□□□□ 0.35
TNFRSF1B-204ENST00000536782 ZNF525Q8N782 197 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms