RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 NIPAL3Q6P499 406 aa11.78□□□□□ -0.52
SPG11-203ENST00000535302 TSPYL5Q86VY4 417 aaPredicted RBP11.78□□□□□ -0.52
SPG11-203ENST00000535302 PGBD5Q8N414 524 aa11.78□□□□□ -0.52
SPG11-203ENST00000535302 ZNF75AQ96N20 296 aa11.78□□□□□ -0.52
SPG11-203ENST00000535302 NMNAT2Q9BZQ4 307 aa11.78□□□□□ -0.52
SPG11-203ENST00000535302 TUBB1Q9H4B7 451 aa11.78□□□□□ -0.52
SPG11-203ENST00000535302 MYOTQ9UBF9 498 aa11.78□□□□□ -0.52
SPG11-203ENST00000535302 LHX3Q9UBR4 397 aa11.78□□□□□ -0.52
SPG11-203ENST00000535302 MBLAC1A4D2B0 266 aaPredicted RBP11.77□□□□□ -0.52
SPG11-203ENST00000535302 PMP2P02689 132 aa11.77□□□□□ -0.52
SPG11-203ENST00000535302 GSTP1P09211 210 aaKnown RBP11.77□□□□□ -0.52
SPG11-203ENST00000535302 CD38P28907 300 aa11.77□□□□□ -0.52
SPG11-203ENST00000535302 POU3F1Q03052 451 aaPredicted RBP11.77□□□□□ -0.52
SPG11-203ENST00000535302 LRRC26Q2I0M4 334 aa11.77□□□□□ -0.52
SPG11-203ENST00000535302 ACSM3Q53FZ2 586 aa11.77□□□□□ -0.52
SPG11-203ENST00000535302 STEAP2Q8NFT2 490 aa11.77□□□□□ -0.52
SPG11-203ENST00000535302 HYLS1Q96M11 299 aa11.77□□□□□ -0.52
SPG11-203ENST00000535302 DOT1LQ8TEK3 1739 aa11.77□□□□□ -0.52
SPG11-203ENST00000535302 LYRM1O43325 122 aa11.77□□□□□ -0.52
SPG11-203ENST00000535302 WNT4P56705 351 aa11.77□□□□□ -0.52
SPG11-203ENST00000535302 CLDN17P56750 224 aa11.77□□□□□ -0.52
SPG11-203ENST00000535302 CXADRP78310 365 aa11.77□□□□□ -0.52
SPG11-203ENST00000535302 SERTAD2Q14140 314 aa11.77□□□□□ -0.52
SPG11-203ENST00000535302 TRNP1Q6NT89 227 aa11.77□□□□□ -0.52
SPG11-203ENST00000535302 BAIAP2L2Q6UXY1 529 aa11.77□□□□□ -0.52
SPG11-203ENST00000535302 GPR150Q8NGU9 434 aa11.77□□□□□ -0.52
SPG11-203ENST00000535302 LINC01599Q8WXQ3 324 aa11.77□□□□□ -0.52
SPG11-203ENST00000535302 RTP4Q96DX8 246 aa11.77□□□□□ -0.52
SPG11-203ENST00000535302 CUTCQ9NTM9 273 aa11.77□□□□□ -0.52
SPG11-203ENST00000535302 DHCR7Q9UBM7 475 aaKnown RBP11.77□□□□□ -0.52
SPG11-203ENST00000535302 MYH1P12882 1939 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 MYH4Q9Y623 1939 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 BCAT2O15382 392 aaPredicted RBP11.77□□□□□ -0.53
SPG11-203ENST00000535302 NFATC3Q12968 1075 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 TBPL2Q6SJ96 375 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 APOOLQ6UXV4 268 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 ADAMTS16Q8TE57 1224 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 THAP7Q9BT49 309 aaPredicted RBP11.77□□□□□ -0.53
SPG11-203ENST00000535302 CRYM-AS1A6NIL9 109 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 MELKQ14680 651 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 PRSS48Q7RTY5 328 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 ZNF300Q96RE9 604 aaPredicted RBP11.77□□□□□ -0.53
SPG11-203ENST00000535302 ARNT2Q9HBZ2 717 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 TMEM181Q9P2C4 612 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 I6L893 689 aaPredicted RBP11.77□□□□□ -0.53
SPG11-203ENST00000535302 NPC1O15118 1278 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 OR7C1O76099 320 aaPredicted RBP11.77□□□□□ -0.53
SPG11-203ENST00000535302 AIFM1O95831 613 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 AKAIN1P0CW23 69 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 NME2P22392 152 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 GABRA4P48169 554 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 SUOXP51687 545 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 GABARAPL2P60520 117 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 OR13C2Q8NGS9 318 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 TREX1Q9NSU2 369 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 NSG1A0A0A6YYJ2 146 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 FADS1O60427 444 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 GLSO94925 669 aaPredicted RBP11.77□□□□□ -0.53
SPG11-203ENST00000535302 SORDQ00796 357 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 BTN1A1Q13410 526 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 SPARTQ8N0X7 666 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 PAPD5Q8NDF8 572 aaKnown RBP11.77□□□□□ -0.53
SPG11-203ENST00000535302 OR5D14Q8NGL3 314 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 MIB2Q96AX9 1013 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 SDR39U1Q9NRG7 319 aaPredicted RBP11.77□□□□□ -0.53
SPG11-203ENST00000535302 FBXL2Q9UKC9 423 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 URGCP-MRPS24S4R325 110 aa11.77□□□□□ -0.53
SPG11-203ENST00000535302 ZNF891A8MT65 544 aaPredicted RBP11.76□□□□□ -0.53
SPG11-203ENST00000535302 H0YGG7 62 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 HS3ST1O14792 307 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 SCRG1O75711 98 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 ACTBP60709 375 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 ACTG1P63261 375 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 SMN1Q16637 294 aaKnown RBP11.76□□□□□ -0.53
SPG11-203ENST00000535302 CGB2Q6NT52 195 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 LILRA3Q8N6C8 439 aaPredicted RBP11.76□□□□□ -0.53
SPG11-203ENST00000535302 SGK3Q96BR1 496 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 MFFQ9GZY8 342 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 NENFQ9UMX5 172 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 SCML1Q9UN30 329 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 ARPC4-TTLL3A0A0A6YYG9 625 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 EGFP01133 1207 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 CRABP1P29762 137 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 CA5AP35218 305 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 IDUAP35475 653 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 ESPNLQ6ZVH7 1005 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 VRK3Q8IV63 474 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 TANKQ92844 425 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 ZBTB8AQ96BR9 441 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 INTS14Q96SY0 518 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 OCSTAMPQ9BR26 566 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 SGPP1Q9BX95 441 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 ZNF696Q9H7X3 374 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 GDE1Q9NZC3 331 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 MYH7BA7E2Y1 1941 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 XRCC3O43542 346 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 HLA-AP01891 365 aaKnown RBP11.76□□□□□ -0.53
SPG11-203ENST00000535302 KIR2DS3Q14952 304 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 FAM213BQ8TBF2 198 aa11.76□□□□□ -0.53
SPG11-203ENST00000535302 RABL2AQ9UBK7 228 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms