RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 SCDO00767 359 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 DBTP11182 482 aaKnown RBP11.22□□□□□ -0.61
SCARB1-204ENST00000535005 GGT2P36268 569 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 NKX2-5P52952 324 aaPredicted RBP11.22□□□□□ -0.61
SCARB1-204ENST00000535005 EEF1A1P68104 462 aaKnown RBP11.22□□□□□ -0.61
SCARB1-204ENST00000535005 CXADRP78310 365 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 FGFBP1Q14512 234 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 IRF3Q14653 427 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 ZNF311Q5JNZ3 666 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 PDZK1Q5T2W1 519 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 SLC22A10Q63ZE4 541 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 C19orf48Q6RUI8 117 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 IGFL3Q6UXB1 125 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 APOOLQ6UXV4 268 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 VRK2Q86Y07 508 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 LIX1LQ8IVB5 337 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 ATG16L2Q8NAA4 619 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 GRHL3Q8TE85 626 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 APH1BQ8WW43 257 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 WDFY2Q96P53 400 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 EVA1AQ9H8M9 152 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 HHATLQ9HCP6 504 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 DDX28Q9NUL7 540 aaKnown RBP11.22□□□□□ -0.61
SCARB1-204ENST00000535005 LRFN1Q9P244 771 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 ZNF443Q9Y2A4 671 aaPredicted RBP11.22□□□□□ -0.61
SCARB1-204ENST00000535005 SAMHD1Q9Y3Z3 626 aaKnown RBP11.22□□□□□ -0.61
SCARB1-204ENST00000535005 EXPH5Q8NEV8 1989 aa11.22□□□□□ -0.61
SCARB1-204ENST00000535005 CACNA1GO43497 2377 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 PRAMEF25A6NGN4 478 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 SUV39H1O43463 412 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 NEURL1O76050 574 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 HPGDP15428 266 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 PRKCAP17252 672 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 EVI2BP34910 448 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 GAS1P54826 345 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 KCNJ10P78508 379 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 OC90Q02509 493 aaPredicted RBP11.21□□□□□ -0.61
SCARB1-204ENST00000535005 DUSP7Q16829 419 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 SLC30A6Q6NXT4 461 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 GRAMD2AQ8IUY3 354 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 MISPQ8IVT2 679 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 ENTHD1Q8IYW4 607 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 GPR32P1Q8NGA4 272 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 OR5M3Q8NGP4 307 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 ST6GAL2Q96JF0 529 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 CEP19Q96LK0 163 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 FRMD6Q96NE9 622 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 DOHHQ9BU89 302 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 ANGPTL4Q9BY76 406 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 PRORYQ9H606 182 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 CHST2Q9Y4C5 530 aa11.21□□□□□ -0.61
SCARB1-204ENST00000535005 CNTRLQ7Z7A1 2325 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 SLC35F4A4IF30 521 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 CDHR4A6H8M9 788 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 EFCAB10A6NFE3 127 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 MKRN2OSH3BPM6 223 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 EPPINO95925 133 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 LGI1O95970 557 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 OPN1SWP03999 348 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 M6PRP20645 277 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 GTF2E2P29084 291 aaKnown RBP11.21□□□□□ -0.62
SCARB1-204ENST00000535005 RRM2P31350 389 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 PTGDSP41222 190 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 RGS6P49758 472 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 ARMCX4Q5H9R4 360 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 ZNF836Q6ZNA1 936 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 MDGA2Q7Z553 956 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 HMGN2P46Q86SG4 172 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 MDS2Q8NDY4 140 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 FAM71CQ8NEG0 241 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 CDCA4Q9BXL8 241 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 TBL1XR1Q9BZK7 514 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 ANKRD10Q9NXR5 420 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 PLA2G3Q9NZ20 509 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 CNOT2Q9NZN8 540 aaKnown RBP11.21□□□□□ -0.62
SCARB1-204ENST00000535005 ZMIZ1Q9ULJ6 1067 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 SLC35A3Q9Y2D2 325 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 U3KQV3 271 aa11.21□□□□□ -0.62
SCARB1-204ENST00000535005 MGAQ8IWI9 3026 aa11.2□□□□□ -0.62
SCARB1-204ENST00000535005 SH3D21A4FU49 640 aa11.2□□□□□ -0.62
SCARB1-204ENST00000535005 MPZL2O60487 215 aa11.2□□□□□ -0.62
SCARB1-204ENST00000535005 ZNF682O95780 498 aa11.2□□□□□ -0.62
SCARB1-204ENST00000535005 CCL3P10147 92 aa11.2□□□□□ -0.62
SCARB1-204ENST00000535005 PLAURQ03405 335 aa11.2□□□□□ -0.62
SCARB1-204ENST00000535005 OR1C1Q15619 314 aa11.2□□□□□ -0.62
SCARB1-204ENST00000535005 EIPR1Q53HC9 387 aa11.2□□□□□ -0.62
SCARB1-204ENST00000535005 YIF1BQ5BJH7 314 aa11.2□□□□□ -0.62
SCARB1-204ENST00000535005 MRPL2Q5T653 305 aaKnown RBP11.2□□□□□ -0.62
SCARB1-204ENST00000535005 TIGD3Q6B0B8 471 aa11.2□□□□□ -0.62
SCARB1-204ENST00000535005 MARCH3Q86UD3 253 aa11.2□□□□□ -0.62
SCARB1-204ENST00000535005 CCDC71Q8IV32 467 aaPredicted RBP11.2□□□□□ -0.62
SCARB1-204ENST00000535005 CELF2-AS1Q8N7Q2 184 aa11.2□□□□□ -0.62
SCARB1-204ENST00000535005 TM9SF4Q92544 642 aa11.2□□□□□ -0.62
SCARB1-204ENST00000535005 SIGLEC12Q96PQ1 595 aa11.2□□□□□ -0.62
SCARB1-204ENST00000535005 ARHGDIGQ99819 225 aa11.2□□□□□ -0.62
SCARB1-204ENST00000535005 RTN4RQ9BZR6 473 aa11.2□□□□□ -0.62
SCARB1-204ENST00000535005 METTL7AQ9H8H3 244 aa11.2□□□□□ -0.62
SCARB1-204ENST00000535005 PROK2Q9HC23 129 aa11.2□□□□□ -0.62
SCARB1-204ENST00000535005 EXOSC3Q9NQT5 275 aaKnown RBP11.2□□□□□ -0.62
SCARB1-204ENST00000535005 SDHAF3Q9NRP4 125 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms