RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 SLC38A5Q8WUX1 472 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 VPS33AQ96AX1 596 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 TLCD1Q96CP7 247 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 AURKBQ96GD4 344 aaPredicted RBP7.84□□□□□ -1.15
COPB1-211ENST00000534234 RADILQ96JH8 1075 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 TRAF4Q9BUZ4 470 aaPredicted RBP7.84□□□□□ -1.15
COPB1-211ENST00000534234 C1QTNF6Q9BXI9 259 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 ALG2Q9H553 416 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 TMBIM4Q9HC24 238 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 FAIMQ9NVQ4 179 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 P2RX2Q9UBL9 471 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 UPB1Q9UBR1 384 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 MALT1Q9UDY8 824 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 PRDM4Q9UKN5 801 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 ZNF232Q9UNY5 417 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 SLC9A8Q9Y2E8 581 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 FLVCR1Q9Y5Y0 555 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 SLC25A15Q9Y619 301 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 DSPPQ9NZW4 1301 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 A0A0G2JPF8 293 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 TMEM247A6NEH6 219 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 HNRNPCL2B2RXH8 293 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 HNRNPCL3B7ZW38 293 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 INAFM1C9JVW0 142 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 RNF223E7ERA6 249 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 KLF11O14901 512 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 HNRNPCL1O60812 293 aaKnown RBP7.84□□□□□ -1.15
COPB1-211ENST00000534234 NDUFS7O75251 213 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 AKR7A3O95154 331 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 GPIP06744 558 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 ITGA5P08648 1049 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 HNRNPCL4P0DMR1 293 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 PTNP21246 168 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 ACVR1BP36896 505 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 ZNF83P51522 516 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 CDH11P55287 796 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 PPP2R2BQ00005 443 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 BNIP2Q12982 314 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 LARS2Q15031 903 aaKnown RBP7.84□□□□□ -1.15
COPB1-211ENST00000534234 GTDC1Q4AE62 458 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 LIN52Q52LA3 116 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 BEND6Q5SZJ8 279 aaPredicted RBP7.84□□□□□ -1.15
COPB1-211ENST00000534234 OTUD3Q5T2D3 398 aaPredicted RBP7.84□□□□□ -1.15
COPB1-211ENST00000534234 TSPO2Q5TGU0 170 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 C9orf135Q5VTT2 229 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 TMEM225Q6GV28 225 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 WBP2NLQ6ICG8 309 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 SLC22A25Q6T423 547 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 KLHL17Q6TDP4 642 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 ZNF836Q6ZNA1 936 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 MSANTD1Q6ZTZ1 278 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 MIER2Q8N344 545 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 CLIP4Q8N3C7 705 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 TMEM99Q8N816 258 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 ZIC4Q8N9L1 334 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 OR52E4Q8NGH9 312 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 OR9I1Q8NGQ6 314 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 GRIP2Q9C0E4 1043 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 SLCO5A1Q9H2Y9 848 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 ARMC7Q9H6L4 198 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 SLC7A10Q9NS82 523 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 THUMPD1Q9NXG2 353 aaKnown RBP7.84□□□□□ -1.15
COPB1-211ENST00000534234 MGAT4BQ9UQ53 548 aa7.84□□□□□ -1.15
COPB1-211ENST00000534234 ROS1P08922 2347 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 FAM234BA2RU67 622 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 LIPT2A6NK58 231 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 A8MVM7 634 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 PDLIM1O00151 329 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 IGHV4-39P01824 125 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 THBS1P07996 1170 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 PRG2P13727 222 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 NCF2P19878 526 aaPredicted RBP7.83□□□□□ -1.16
COPB1-211ENST00000534234 CD40P25942 277 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 TTKP33981 857 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 TGFBR3Q03167 851 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 RGNQ15493 299 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 OR7A5Q15622 319 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 ZSWIM7Q19AV6 140 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 RPS26P11Q5JNZ5 115 aaPredicted RBP7.83□□□□□ -1.16
COPB1-211ENST00000534234 AGAP6Q5VW22 663 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 EPGNQ6UW88 154 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 AAED1Q7RTV5 226 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 DTX2Q86UW9 622 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 DEPDC4Q8N2C3 294 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 WDR31Q8NA23 367 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 MAPK1IP1LQ8NDC0 245 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 GTF2H4Q92759 462 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 TMEM19Q96HH6 336 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 HS6ST2Q96MM7 605 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 ZNF385AQ96PM9 386 aaKnown RBP7.83□□□□□ -1.16
COPB1-211ENST00000534234 SF3B5Q9BWJ5 86 aaKnown RBP7.83□□□□□ -1.16
COPB1-211ENST00000534234 TAPBPLQ9BX59 468 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 REG4Q9BYZ8 158 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 CACYBPQ9HB71 228 aaKnown RBP7.83□□□□□ -1.16
COPB1-211ENST00000534234 ADPRHL2Q9NX46 363 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 DCTN4Q9UJW0 460 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 GDF2Q9UK05 429 aaPredicted RBP7.83□□□□□ -1.16
COPB1-211ENST00000534234 POU2F3Q9UKI9 436 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 ZNF443Q9Y2A4 671 aaPredicted RBP7.83□□□□□ -1.16
COPB1-211ENST00000534234 B3GALT5Q9Y2C3 310 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms