RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CCDC28BQ9BUN5 200 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 SEC61A2Q9H9S3 476 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 A4GALTQ9NPC4 353 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 TIGARQ9NQ88 270 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 GLRX2Q9NS18 164 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 ADPRHL2Q9NX46 363 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 PAQR5Q9NXK6 330 aaPredicted RBP8.48□□□□□ -1.05
SSBP3-215ENST00000533946 ZNF226Q9NYT6 803 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 TMEM181Q9P2C4 612 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 KLHL9Q9P2J3 617 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 STOML1Q9UBI4 398 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 P2RX2Q9UBL9 471 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 GPR52Q9Y2T5 361 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 FLVCR1Q9Y5Y0 555 aa8.48□□□□□ -1.05
SSBP3-215ENST00000533946 FBN1P35555 2871 aaKnown RBP8.48□□□□□ -1.05
SSBP3-215ENST00000533946 SONP18583 2426 aaKnown RBP8.48□□□□□ -1.05
SSBP3-215ENST00000533946 UQCRHLA0A096LP55 91 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 ZNF503-AS2A6NEH8 195 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 GJE1A6NN92 205 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 TMEM229AB2RXF0 380 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 SHISA9B4DS77 424 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 FTCDNL1E5RQL4 147 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 H7C1Q1 480 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 M0R3H8 397 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 SMAD7O15105 426 aaKnown RBP8.47□□□□□ -1.05
SSBP3-215ENST00000533946 SOX30O94993 753 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 LYPD3O95274 346 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 TGDSO95455 350 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 HPRP00739 348 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 DANCRP0C864 163 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 PABPC4LP0CB38 370 aaKnown RBP8.47□□□□□ -1.05
SSBP3-215ENST00000533946 HLA-DOBP13765 273 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 COX5AP20674 150 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 IL32P24001 234 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 RPS5P46782 204 aaKnown RBP8.47□□□□□ -1.05
SSBP3-215ENST00000533946 SELENOPP49908 381 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 GZMMP51124 257 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 ZNF83P51522 516 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 TUBA1BP68363 451 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 TUBA4AP68366 448 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 ITGADQ13349 1161 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 SLC17A1Q14916 467 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 NPTX1Q15818 432 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 RUNDC3AQ59EK9 446 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 ZNF311Q5JNZ3 666 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 PHYHD1Q5SRE7 291 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 WDR88Q6ZMY6 472 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 TUBA1AQ71U36 451 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 MYPOPQ86VE0 399 aaPredicted RBP8.47□□□□□ -1.05
SSBP3-215ENST00000533946 EPHX4Q8IUS5 362 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 PEX5LQ8IYB4 626 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 ZNF100Q8IYN0 542 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 UBE2J2Q8N2K1 259 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 SLC43A2Q8N370 569 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 GPR32P1Q8NGA4 272 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 DYDC1Q8WWB3 177 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 KISS1RQ969F8 398 aaPredicted RBP8.47□□□□□ -1.05
SSBP3-215ENST00000533946 TAAR8Q969N4 342 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 MAGEB18Q96M61 343 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 CCL19Q99731 98 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 SPATA9Q9BWV2 254 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 BCL2L10Q9HD36 194 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 SERINC1Q9NRX5 453 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 GDF2Q9UK05 429 aaPredicted RBP8.47□□□□□ -1.05
SSBP3-215ENST00000533946 LAMP3Q9UQV4 416 aa8.47□□□□□ -1.05
SSBP3-215ENST00000533946 NOSIPQ9Y314 301 aaKnown RBP8.47□□□□□ -1.05
SSBP3-215ENST00000533946 MAGED1Q9Y5V3 778 aaPredicted RBP8.47□□□□□ -1.05
SSBP3-215ENST00000533946 JMJD1CQ15652 2540 aa8.46□□□□□ -1.05
SSBP3-215ENST00000533946 A0A0G2JND7 137 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 A0A0G2JPF8 293 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 A0A1B0GWA3 101 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 HMGB1P1B2RPK0 211 aaPredicted RBP8.46□□□□□ -1.06
SSBP3-215ENST00000533946 HNRNPCL2B2RXH8 293 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 HNRNPCL3B7ZW38 293 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 E7EQL1 145 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 FAAHO00519 579 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 HS3ST1O14792 307 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 HNRNPCL1O60812 293 aaKnown RBP8.46□□□□□ -1.06
SSBP3-215ENST00000533946 UPK3AO75631 287 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 LY6G6DO95868 133 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 HNRNPCL4P0DMR1 293 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 CDH2P19022 906 aaPredicted RBP8.46□□□□□ -1.06
SSBP3-215ENST00000533946 TNFRSF1BP20333 461 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 CXCR1P25024 350 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 PTH2RP49190 550 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 SLC16A1P53985 500 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 CRISP3P54108 245 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 CDK6Q00534 326 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 GUCY1A3Q02108 690 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 P2RY6Q15077 328 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 GABRA6Q16445 453 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 DUSP7Q16829 419 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 LIN52Q52LA3 116 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 HIKESHIQ53FT3 197 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 BEX5Q5H9J7 111 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 OTUD3Q5T2D3 398 aaPredicted RBP8.46□□□□□ -1.06
SSBP3-215ENST00000533946 GCNT6Q5T4J0 391 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 RNF220Q5VTB9 566 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 C1orf140Q5VVS0 124 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 FBXW9Q5XUX1 488 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms