RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 LCP2Q13094 533 aa10.56□□□□□ -0.72
SVIP-205ENST00000533774 TRIM46Q7Z4K8 759 aa10.56□□□□□ -0.72
SVIP-205ENST00000533774 TMEM45BQ96B21 275 aa10.56□□□□□ -0.72
SVIP-205ENST00000533774 ARL8AQ96BM9 186 aa10.56□□□□□ -0.72
SVIP-205ENST00000533774 PPCDCQ96CD2 204 aa10.56□□□□□ -0.72
SVIP-205ENST00000533774 LRRC58Q96CX6 371 aa10.56□□□□□ -0.72
SVIP-205ENST00000533774 AURKBQ96GD4 344 aaPredicted RBP10.56□□□□□ -0.72
SVIP-205ENST00000533774 TSSK3Q96PN8 268 aa10.56□□□□□ -0.72
SVIP-205ENST00000533774 SDF2Q99470 211 aa10.56□□□□□ -0.72
SVIP-205ENST00000533774 REEP4Q9H6H4 257 aa10.56□□□□□ -0.72
SVIP-205ENST00000533774 ACSS3Q9H6R3 686 aa10.56□□□□□ -0.72
SVIP-205ENST00000533774 MID1IP1Q9NPA3 183 aa10.56□□□□□ -0.72
SVIP-205ENST00000533774 OBP2BQ9NPH6 170 aa10.56□□□□□ -0.72
SVIP-205ENST00000533774 ZNF275Q9NSD4 429 aaPredicted RBP10.56□□□□□ -0.72
SVIP-205ENST00000533774 PARPBPQ9NWS1 579 aa10.56□□□□□ -0.72
SVIP-205ENST00000533774 OPN4Q9UHM6 478 aa10.56□□□□□ -0.72
SVIP-205ENST00000533774 HDGFL3Q9Y3E1 203 aa10.56□□□□□ -0.72
SVIP-205ENST00000533774 A0A096LPE4 126 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 ARPC4-TTLL3A0A0A6YYG9 625 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 A0A1W2PPZ6 126 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 OR6C65A6NJZ3 312 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 TRIM49D1C9J1S8 452 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 DNPH1O43598 174 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 PLPP2O43688 288 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 FCMRO60667 390 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 SEC22BO75396 215 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 RSL1D1O76021 490 aaKnown RBP10.55□□□□□ -0.72
SVIP-205ENST00000533774 URI1O94763 535 aaPredicted RBP10.55□□□□□ -0.72
SVIP-205ENST00000533774 BCL10O95999 233 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 IGKV3-15P01624 115 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 UBTFL6P0CB48 400 aaPredicted RBP10.55□□□□□ -0.72
SVIP-205ENST00000533774 SDC1P18827 310 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 APOBEC1P41238 236 aaKnown RBP10.55□□□□□ -0.72
SVIP-205ENST00000533774 SEC24CP53992 1094 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 ZNF141Q15928 474 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 MAPK14Q16539 360 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 OCLNQ16625 522 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 IMPG1Q17R60 797 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 C3orf36Q3SXR2 165 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 BPIFB2Q8N4F0 458 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 SIGLECL1Q8N7X8 197 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 OR5D16Q8NGK9 328 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 FCRL1Q96LA6 429 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 ACTRT3Q9BYD9 372 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 MRPL37Q9BZE1 423 aaKnown RBP10.55□□□□□ -0.72
SVIP-205ENST00000533774 SERHL2Q9H4I8 314 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 DDX28Q9NUL7 540 aaKnown RBP10.55□□□□□ -0.72
SVIP-205ENST00000533774 TMEM45AQ9NWC5 275 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 NINJ2Q9NZG7 142 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 TMEM181Q9P2C4 612 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 ZDHHC2Q9UIJ5 367 aa10.55□□□□□ -0.72
SVIP-205ENST00000533774 ZC3H12DA2A288 527 aaKnown RBP10.54□□□□□ -0.72
SVIP-205ENST00000533774 DEAF1O75398 565 aaPredicted RBP10.54□□□□□ -0.72
SVIP-205ENST00000533774 RP2O75695 350 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 PRSS23O95084 383 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 CSTAP01040 98 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 ACHEP22303 614 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 PRKAA2P54646 552 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 MYBPC1Q00872 1141 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 ZP4Q12836 540 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 GPR68Q15743 365 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 AAED1Q7RTV5 226 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 RIBC1Q8N443 379 aaPredicted RBP10.54□□□□□ -0.72
SVIP-205ENST00000533774 FAM71CQ8NEG0 241 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 OR2T11Q8NH01 316 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 ADAMTS15Q8TE58 950 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 TMEM234Q8WY98 164 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 L3HYPDHQ96EM0 354 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 ANKRD27Q96NW4 1050 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 OR7D2Q96RA2 312 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 PKP2Q99959 881 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 NMUR2Q9GZQ4 415 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 MED29Q9NX70 200 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 MYEF2Q9P2K5 600 aaKnown RBP10.54□□□□□ -0.72
SVIP-205ENST00000533774 REV1Q9UBZ9 1251 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 TRAPPC4Q9Y296 219 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 CORINQ9Y5Q5 1042 aa10.54□□□□□ -0.72
SVIP-205ENST00000533774 TMEM72A0PK05 275 aa10.53□□□□□ -0.72
SVIP-205ENST00000533774 DNAJC9-AS1A6NH13 148 aa10.53□□□□□ -0.72
SVIP-205ENST00000533774 PPIHO43447 177 aaKnown RBP10.53□□□□□ -0.72
SVIP-205ENST00000533774 UPK3AO75631 287 aa10.53□□□□□ -0.72
SVIP-205ENST00000533774 UGT2B17O75795 530 aa10.53□□□□□ -0.72
SVIP-205ENST00000533774 MPZL1O95297 269 aa10.53□□□□□ -0.72
SVIP-205ENST00000533774 PRTN3P24158 256 aa10.53□□□□□ -0.72
SVIP-205ENST00000533774 ATP5F1P24539 256 aaPredicted RBP10.53□□□□□ -0.72
SVIP-205ENST00000533774 RYKP34925 604 aa10.53□□□□□ -0.72
SVIP-205ENST00000533774 PGM1P36871 562 aa10.53□□□□□ -0.72
SVIP-205ENST00000533774 ALDH3B1P43353 468 aa10.53□□□□□ -0.72
SVIP-205ENST00000533774 CCT3P49368 545 aaKnown RBP10.53□□□□□ -0.72
SVIP-205ENST00000533774 SELENOPP49908 381 aa10.53□□□□□ -0.72
SVIP-205ENST00000533774 UBE2NP61088 152 aaKnown RBP10.53□□□□□ -0.72
SVIP-205ENST00000533774 RPS26P62854 115 aaKnown RBP10.53□□□□□ -0.72
SVIP-205ENST00000533774 POU3F1Q03052 451 aaPredicted RBP10.53□□□□□ -0.72
SVIP-205ENST00000533774 SNTB2Q13425 540 aaKnown RBP10.53□□□□□ -0.72
SVIP-205ENST00000533774 TP53BP2Q13625 1128 aa10.53□□□□□ -0.72
SVIP-205ENST00000533774 MAD2L1BPQ15013 274 aaPredicted RBP10.53□□□□□ -0.72
SVIP-205ENST00000533774 SLC9B1Q4ZJI4 515 aa10.53□□□□□ -0.72
SVIP-205ENST00000533774 KRT80Q6KB66 452 aa10.53□□□□□ -0.72
SVIP-205ENST00000533774 LRP11Q86VZ4 500 aa10.53□□□□□ -0.72
SVIP-205ENST00000533774 HOMEZQ8IX15 550 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms