RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 SIGLEC12Q96PQ1 595 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 TSSK6Q9BXA6 273 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 SLC25A19Q9HC21 320 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 PROK2Q9HC23 129 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 KRCC1Q9NPI7 259 aaPredicted RBP16.8■□□□□ 0.28
SMPD1-208ENST00000533123 EXOSC3Q9NQT5 275 aaKnown RBP16.8■□□□□ 0.28
SMPD1-208ENST00000533123 ICAM5Q9UMF0 924 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 MED31Q9Y3C7 131 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 PCDHGB1Q9Y5G3 927 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 HRH3Q9Y5N1 445 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 WIF1Q9Y5W5 379 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 BOD1L1Q8NFC6 3051 aa16.79■□□□□ 0.28
SMPD1-208ENST00000533123 NEURL1O76050 574 aa16.79■□□□□ 0.28
SMPD1-208ENST00000533123 HNRNPCP07910 306 aaKnown RBP eCLIP16.79■□□□□ 0.28
SMPD1-208ENST00000533123 STSP08842 583 aa16.79■□□□□ 0.28
SMPD1-208ENST00000533123 ADRA2AP08913 450 aa16.79■□□□□ 0.28
SMPD1-208ENST00000533123 ENDOUP21128 410 aaKnown RBP16.79■□□□□ 0.28
SMPD1-208ENST00000533123 PRKCDQ05655 676 aa16.79■□□□□ 0.28
SMPD1-208ENST00000533123 SNTA1Q13424 505 aa16.79■□□□□ 0.28
SMPD1-208ENST00000533123 MISPQ8IVT2 679 aa16.79■□□□□ 0.28
SMPD1-208ENST00000533123 RNF113BQ8IZP6 322 aaKnown RBP16.79■□□□□ 0.28
SMPD1-208ENST00000533123 PSD4Q8NDX1 1056 aa16.79■□□□□ 0.28
SMPD1-208ENST00000533123 OR8J1Q8NGP2 316 aa16.79■□□□□ 0.28
SMPD1-208ENST00000533123 SNRNP27Q8WVK2 155 aaKnown RBP16.79■□□□□ 0.28
SMPD1-208ENST00000533123 ZNF524Q96C55 264 aa16.79■□□□□ 0.28
SMPD1-208ENST00000533123 BPIFA2Q96DR5 249 aa16.79■□□□□ 0.28
SMPD1-208ENST00000533123 ZNF426Q9BUY5 554 aa16.79■□□□□ 0.28
SMPD1-208ENST00000533123 ACOT13Q9NPJ3 140 aa16.79■□□□□ 0.28
SMPD1-208ENST00000533123 RPS6KB2Q9UBS0 482 aa16.79■□□□□ 0.28
SMPD1-208ENST00000533123 GPR52Q9Y2T5 361 aa16.79■□□□□ 0.28
SMPD1-208ENST00000533123 CACNA1GO43497 2377 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 UNC119BA6NIH7 251 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 ZNF701M0R085 212 aaPredicted RBP16.78■□□□□ 0.28
SMPD1-208ENST00000533123 TAF4O00268 1085 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 EIF4E2O60573 245 aaKnown RBP16.78■□□□□ 0.28
SMPD1-208ENST00000533123 NUDT14O95848 222 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 CH25HO95992 272 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 FXYD6P3P58550 94 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 MFAP5Q13361 173 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 COL28A1Q2UY09 1125 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 ULK3Q6PHR2 472 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 UNQ6494/PRO21346Q6UXR6 183 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 Q6ZNX1 250 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 GPALPP1Q8IXQ4 340 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 ZNF440Q8IYI8 595 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 OR13C2Q8NGS9 318 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 C12orf43Q96C57 262 aaKnown RBP16.78■□□□□ 0.28
SMPD1-208ENST00000533123 SAMD8Q96LT4 415 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 ANGPTL4Q9BY76 406 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 POLDIP3Q9BY77 421 aaKnown RBP16.78■□□□□ 0.28
SMPD1-208ENST00000533123 FAIMQ9NVQ4 179 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 IL20Q9NYY1 176 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 MED11Q9P086 117 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 PPP4R1LQ9P1A2 415 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 CDH10Q9Y6N8 788 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 ATMQ13315 3056 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 SH3D21A4FU49 640 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 ZNF99A8MXY4 864 aaPredicted RBP16.78■□□□□ 0.28
SMPD1-208ENST00000533123 P04436 131 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 CDK1P06493 297 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 ST3GAL4Q11206 333 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 OR1C1Q15619 314 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 SNAPC1Q16533 368 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 TMEM201Q5SNT2 666 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 TMEM81Q6P7N7 255 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 TRUB1Q8WWH5 349 aaKnown RBP16.78■□□□□ 0.28
SMPD1-208ENST00000533123 OSTF1Q92882 214 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 MYDGFQ969H8 173 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 SDHAF3Q9NRP4 125 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 TBCCD1Q9NVR7 557 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 TAS2R16Q9NYV7 291 aa16.78■□□□□ 0.28
SMPD1-208ENST00000533123 K7ENP7 123 aa16.77■□□□□ 0.28
SMPD1-208ENST00000533123 DCKP27707 260 aa16.77■□□□□ 0.28
SMPD1-208ENST00000533123 P2RX1P51575 399 aa16.77■□□□□ 0.28
SMPD1-208ENST00000533123 EFNB1P98172 346 aa16.77■□□□□ 0.28
SMPD1-208ENST00000533123 TOMM34Q15785 309 aaPredicted RBP16.77■□□□□ 0.28
SMPD1-208ENST00000533123 INO80CQ6PI98 192 aaPredicted RBP16.77■□□□□ 0.28
SMPD1-208ENST00000533123 LINC00114Q6XXX2 140 aa16.77■□□□□ 0.28
SMPD1-208ENST00000533123 WDSUB1Q8N9V3 476 aa16.77■□□□□ 0.28
SMPD1-208ENST00000533123 FANK1Q8TC84 345 aa16.77■□□□□ 0.28
SMPD1-208ENST00000533123 LRR1Q96L50 414 aa16.77■□□□□ 0.28
SMPD1-208ENST00000533123 ENKD1Q9H0I2 346 aa16.77■□□□□ 0.28
SMPD1-208ENST00000533123 SACM1LQ9NTJ5 587 aa16.77■□□□□ 0.28
SMPD1-208ENST00000533123 A0A0G2JMM0 328 aa16.77■□□□□ 0.27
SMPD1-208ENST00000533123 A0A1W2PPB8 328 aa16.77■□□□□ 0.27
SMPD1-208ENST00000533123 A0A1W2PRS3 328 aa16.77■□□□□ 0.27
SMPD1-208ENST00000533123 OR5H15A6NDH6 313 aa16.77■□□□□ 0.27
SMPD1-208ENST00000533123 KIR3DP1A8MWS1 328 aa16.77■□□□□ 0.27
SMPD1-208ENST00000533123 SLC25A12O75746 678 aa16.77■□□□□ 0.27
SMPD1-208ENST00000533123 CEACAM4O75871 244 aa16.77■□□□□ 0.27
SMPD1-208ENST00000533123 LCKP06239 509 aa16.77■□□□□ 0.27
SMPD1-208ENST00000533123 SAGP10523 405 aaPredicted RBP16.77■□□□□ 0.27
SMPD1-208ENST00000533123 TTKP33981 857 aa16.77■□□□□ 0.27
SMPD1-208ENST00000533123 DNASE1L1P49184 302 aa16.77■□□□□ 0.27
SMPD1-208ENST00000533123 GPR85P60893 370 aa16.77■□□□□ 0.27
SMPD1-208ENST00000533123 COPZ1P61923 177 aa16.77■□□□□ 0.27
SMPD1-208ENST00000533123 SYT14P1Q58G82 188 aa16.77■□□□□ 0.27
SMPD1-208ENST00000533123 STX19Q8N4C7 294 aa16.77■□□□□ 0.27
SMPD1-208ENST00000533123 OR5W2Q8NH69 310 aa16.77■□□□□ 0.27
SMPD1-208ENST00000533123 RORBQ92753 470 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms