RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 LYZL6O75951 148 aa26.79■■□□□ 1.88
SSSCA1-207ENST00000533115 GPIP06744 558 aa26.79■■□□□ 1.88
SSSCA1-207ENST00000533115 SLC6A2P23975 617 aa26.79■■□□□ 1.88
SSSCA1-207ENST00000533115 HOXC5Q00444 222 aa26.79■■□□□ 1.88
SSSCA1-207ENST00000533115 CEACAM7Q14002 265 aa26.79■■□□□ 1.88
SSSCA1-207ENST00000533115 TAB1Q15750 504 aa26.79■■□□□ 1.88
SSSCA1-207ENST00000533115 ADRM1Q16186 407 aa26.79■■□□□ 1.88
SSSCA1-207ENST00000533115 ALKBH2Q6NS38 261 aa26.79■■□□□ 1.88
SSSCA1-207ENST00000533115 PAQR6Q6TCH4 344 aa26.79■■□□□ 1.88
SSSCA1-207ENST00000533115 RETREG3Q86VR2 466 aa26.79■■□□□ 1.88
SSSCA1-207ENST00000533115 APH1AQ96BI3 265 aa26.79■■□□□ 1.88
SSSCA1-207ENST00000533115 PRR14LQ5THK1 2151 aa26.79■■□□□ 1.88
SSSCA1-207ENST00000533115 TROVE2P10155 538 aaKnown RBP eCLIP26.78■■□□□ 1.88
SSSCA1-207ENST00000533115 IGHV1-2P23083 117 aa26.78■■□□□ 1.88
SSSCA1-207ENST00000533115 NTF4P34130 210 aa26.78■■□□□ 1.88
SSSCA1-207ENST00000533115 OR7A5Q15622 319 aa26.78■■□□□ 1.88
SSSCA1-207ENST00000533115 FBXW9Q5XUX1 488 aa26.78■■□□□ 1.88
SSSCA1-207ENST00000533115 DHRS4L2Q6PKH6 230 aa26.78■■□□□ 1.88
SSSCA1-207ENST00000533115 ATG4DQ86TL0 474 aaPredicted RBP26.78■■□□□ 1.88
SSSCA1-207ENST00000533115 ANKRD27Q96NW4 1050 aa26.78■■□□□ 1.88
SSSCA1-207ENST00000533115 CGREF1Q99674 301 aa26.78■■□□□ 1.88
SSSCA1-207ENST00000533115 MRPL33O75394 65 aaKnown RBP26.77■■□□□ 1.88
SSSCA1-207ENST00000533115 COX5AP20674 150 aa26.77■■□□□ 1.88
SSSCA1-207ENST00000533115 SLC17A1Q14916 467 aa26.77■■□□□ 1.88
SSSCA1-207ENST00000533115 OTUD3Q5T2D3 398 aaPredicted RBP26.77■■□□□ 1.88
SSSCA1-207ENST00000533115 TGIF2LYQ8IUE0 185 aa26.77■■□□□ 1.88
SSSCA1-207ENST00000533115 UBE2J2Q8N2K1 259 aa26.77■■□□□ 1.88
SSSCA1-207ENST00000533115 HIPK4Q8NE63 616 aa26.77■■□□□ 1.88
SSSCA1-207ENST00000533115 ZNF607Q96SK3 696 aa26.77■■□□□ 1.88
SSSCA1-207ENST00000533115 FLVCR1Q9Y5Y0 555 aa26.77■■□□□ 1.88
SSSCA1-207ENST00000533115 VPS13CQ709C8 3753 aa26.77■■□□□ 1.88
SSSCA1-207ENST00000533115 TMEM229AB2RXF0 380 aa26.76■■□□□ 1.87
SSSCA1-207ENST00000533115 IGHV3-9P01782 118 aa26.76■■□□□ 1.87
SSSCA1-207ENST00000533115 ADSLP30566 484 aaPredicted RBP26.76■■□□□ 1.87
SSSCA1-207ENST00000533115 NFYCQ13952 458 aa26.76■■□□□ 1.87
SSSCA1-207ENST00000533115 C1orf140Q5VVS0 124 aa26.76■■□□□ 1.87
SSSCA1-207ENST00000533115 ZNF704Q6ZNC4 412 aaPredicted RBP26.76■■□□□ 1.87
SSSCA1-207ENST00000533115 C20orf204Q6ZNR8 217 aa26.76■■□□□ 1.87
SSSCA1-207ENST00000533115 COMTD1Q86VU5 262 aa26.76■■□□□ 1.87
SSSCA1-207ENST00000533115 TMEM99Q8N816 258 aa26.76■■□□□ 1.87
SSSCA1-207ENST00000533115 TMEM204Q9BSN7 226 aa26.76■■□□□ 1.87
SSSCA1-207ENST00000533115 TAPBPLQ9BX59 468 aa26.76■■□□□ 1.87
SSSCA1-207ENST00000533115 NGBQ9NPG2 151 aa26.76■■□□□ 1.87
SSSCA1-207ENST00000533115 FGFR1OP2Q9NVK5 253 aa26.76■■□□□ 1.87
SSSCA1-207ENST00000533115 RPS6KB2Q9UBS0 482 aa26.76■■□□□ 1.87
SSSCA1-207ENST00000533115 SLC9A8Q9Y2E8 581 aa26.76■■□□□ 1.87
SSSCA1-207ENST00000533115 ZNF469Q96JG9 3925 aaPredicted RBP26.76■■□□□ 1.87
SSSCA1-207ENST00000533115 PRORSD1PA6NEY8 169 aa26.75■■□□□ 1.87
SSSCA1-207ENST00000533115 TPST1O60507 370 aa26.75■■□□□ 1.87
SSSCA1-207ENST00000533115 NPIPB7O75200 414 aa26.75■■□□□ 1.87
SSSCA1-207ENST00000533115 AKR7A3O95154 331 aa26.75■■□□□ 1.87
SSSCA1-207ENST00000533115 ZNF433Q8N7K0 673 aaPredicted RBP26.75■■□□□ 1.87
SSSCA1-207ENST00000533115 STK35Q8TDR2 534 aa26.75■■□□□ 1.87
SSSCA1-207ENST00000533115 PIGTQ969N2 578 aa26.75■■□□□ 1.87
SSSCA1-207ENST00000533115 PIP5K1AQ99755 562 aa26.75■■□□□ 1.87
SSSCA1-207ENST00000533115 PARPBPQ9NWS1 579 aa26.75■■□□□ 1.87
SSSCA1-207ENST00000533115 ANGPT4Q9Y264 503 aa26.75■■□□□ 1.87
SSSCA1-207ENST00000533115 ROS1P08922 2347 aa26.74■■□□□ 1.87
SSSCA1-207ENST00000533115 AQP7P3A6NL99 342 aa26.74■■□□□ 1.87
SSSCA1-207ENST00000533115 SERPINB7O75635 380 aa26.74■■□□□ 1.87
SSSCA1-207ENST00000533115 PLAUP00749 431 aa26.74■■□□□ 1.87
SSSCA1-207ENST00000533115 AQP1P29972 269 aa26.74■■□□□ 1.87
SSSCA1-207ENST00000533115 ARFIP2P53365 341 aa26.74■■□□□ 1.87
SSSCA1-207ENST00000533115 MTPNP58546 118 aa26.74■■□□□ 1.87
SSSCA1-207ENST00000533115 SELPLGQ14242 412 aa26.74■■□□□ 1.87
SSSCA1-207ENST00000533115 CAPRIN1Q14444 709 aaKnown RBP26.74■■□□□ 1.87
SSSCA1-207ENST00000533115 STK11Q15831 433 aa26.74■■□□□ 1.87
SSSCA1-207ENST00000533115 GLIPR1L2Q4G1C9 344 aa26.74■■□□□ 1.87
SSSCA1-207ENST00000533115 CASP12Q6UXS9 341 aa26.74■■□□□ 1.87
SSSCA1-207ENST00000533115 PTOV1Q86YD1 416 aa26.74■■□□□ 1.87
SSSCA1-207ENST00000533115 LSMEM1Q8N8F7 131 aa26.74■■□□□ 1.87
SSSCA1-207ENST00000533115 BHLHE22Q8NFJ8 381 aaPredicted RBP26.74■■□□□ 1.87
SSSCA1-207ENST00000533115 TMUB1Q9BVT8 246 aa26.74■■□□□ 1.87
SSSCA1-207ENST00000533115 SF3B5Q9BWJ5 86 aaKnown RBP26.74■■□□□ 1.87
SSSCA1-207ENST00000533115 ASB6Q9NWX5 421 aa26.74■■□□□ 1.87
SSSCA1-207ENST00000533115 RAI1Q7Z5J4 1906 aaPredicted RBP26.74■■□□□ 1.87
SSSCA1-207ENST00000533115 CD99P14209 185 aa26.73■■□□□ 1.87
SSSCA1-207ENST00000533115 GGT1P19440 569 aa26.73■■□□□ 1.87
SSSCA1-207ENST00000533115 ADAM8P78325 824 aa26.73■■□□□ 1.87
SSSCA1-207ENST00000533115 RBBP4Q09028 425 aa26.73■■□□□ 1.87
SSSCA1-207ENST00000533115 CYP51A1Q16850 503 aa26.73■■□□□ 1.87
SSSCA1-207ENST00000533115 HSP90B2PQ58FF3 399 aa26.73■■□□□ 1.87
SSSCA1-207ENST00000533115 CGB2Q6NT52 195 aa26.73■■□□□ 1.87
SSSCA1-207ENST00000533115 ARMC8Q8IUR7 673 aa26.73■■□□□ 1.87
SSSCA1-207ENST00000533115 C11orf65Q8NCR3 313 aa26.73■■□□□ 1.87
SSSCA1-207ENST00000533115 CCL19Q99731 98 aa26.73■■□□□ 1.87
SSSCA1-207ENST00000533115 C12orf10Q9HB07 376 aa26.73■■□□□ 1.87
SSSCA1-207ENST00000533115 MRGBPQ9NV56 204 aa26.73■■□□□ 1.87
SSSCA1-207ENST00000533115 ADPRHL2Q9NX46 363 aa26.73■■□□□ 1.87
SSSCA1-207ENST00000533115 MALT1Q9UDY8 824 aa26.73■■□□□ 1.87
SSSCA1-207ENST00000533115 ELOA3DA6NLF2 546 aaPredicted RBP26.72■■□□□ 1.87
SSSCA1-207ENST00000533115 VIMP08670 466 aaKnown RBP26.72■■□□□ 1.87
SSSCA1-207ENST00000533115 HTR2AP28223 471 aa26.72■■□□□ 1.87
SSSCA1-207ENST00000533115 ELOA3BQ3SY89 546 aa26.72■■□□□ 1.87
SSSCA1-207ENST00000533115 TIMM23BQ5SRD1 257 aa26.72■■□□□ 1.87
SSSCA1-207ENST00000533115 NCMAPQ5T1S8 102 aa26.72■■□□□ 1.87
SSSCA1-207ENST00000533115 C6orf89Q6UWU4 347 aa26.72■■□□□ 1.87
SSSCA1-207ENST00000533115 SEZ6L2Q6UXD5 910 aa26.72■■□□□ 1.87
SSSCA1-207ENST00000533115 P2RY8Q86VZ1 359 aa26.72■■□□□ 1.87
SSSCA1-207ENST00000533115 ELOA3Q8NG57 546 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms