RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 TRAPPC4Q9Y296 219 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 WDR45Q9Y484 360 aa11.34□□□□□ -0.59
COPB1-209ENST00000533096 CADP27708 2225 aa11.33□□□□□ -0.59
COPB1-209ENST00000533096 AP3D1O14617 1153 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 KCNAB3O43448 404 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 EIF1BO60739 113 aaKnown RBP11.33□□□□□ -0.6
COPB1-209ENST00000533096 TRIM13O60858 407 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 AKR7A3O95154 331 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 ERCC1P07992 297 aaPredicted RBP11.33□□□□□ -0.6
COPB1-209ENST00000533096 PRPS1L1P21108 318 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 TACR3P29371 465 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 SLC1A3P43003 542 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 CLK1P49759 484 aaKnown RBP11.33□□□□□ -0.6
COPB1-209ENST00000533096 ACTG1P63261 375 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 KCNJ10P78508 379 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 H3F3AP84243 136 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 CEACAM7Q14002 265 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 SLC17A1Q14916 467 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 UGT3A2Q3SY77 523 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 TBRG1Q3YBR2 411 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 FAM174BQ3ZCQ3 159 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 ATP6AP1LQ52LC2 224 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 GPAT3Q53EU6 434 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 OTUD3Q5T2D3 398 aaPredicted RBP11.33□□□□□ -0.6
COPB1-209ENST00000533096 ATAD3BQ5T9A4 648 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 OR4F3Q6IEY1 312 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 SPATA21Q7Z572 469 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 C4orf33Q8N1A6 199 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 SVOPLQ8N434 492 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 NATD1Q8N6N6 113 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 TMEM99Q8N816 258 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 ZIC4Q8N9L1 334 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 PSMA8Q8TAA3 256 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 SFXN5Q8TD22 340 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 SLC35G5Q96KT7 338 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 C3orf30Q96M34 536 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 NARFLQ9H6Q4 476 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.33□□□□□ -0.6
COPB1-209ENST00000533096 PCDHGB4Q9UN71 923 aa11.33□□□□□ -0.6
COPB1-209ENST00000533096 RNF103-CHMP3A0A140T963 221 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 ZC3H12DA2A288 527 aaKnown RBP11.32□□□□□ -0.6
COPB1-209ENST00000533096 hCG_2039718K7EN88 272 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 DNPH1O43598 174 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 LYPLA1O75608 230 aaPredicted RBP11.32□□□□□ -0.6
COPB1-209ENST00000533096 AK1P00568 194 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 FGF4P08620 206 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 ADRA2AP08913 450 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 EGR1P18146 543 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 NPR2P20594 1047 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 FKBP2P26885 142 aaKnown RBP11.32□□□□□ -0.6
COPB1-209ENST00000533096 THBS4P35443 961 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 OR7A5Q15622 319 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 ADRM1Q16186 407 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 C6orf136Q5SQH8 315 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 TYW3Q6IPR3 259 aaKnown RBP11.32□□□□□ -0.6
COPB1-209ENST00000533096 TNFAIP8L2Q6P589 184 aaPredicted RBP11.32□□□□□ -0.6
COPB1-209ENST00000533096 OR9K2Q8NGE7 335 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 OR4A15Q8NGL6 344 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 UBASH3BQ8TF42 649 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 NEU4Q8WWR8 484 aaPredicted RBP11.32□□□□□ -0.6
COPB1-209ENST00000533096 PMM1Q92871 262 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 ROPN1LQ96C74 230 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 PLK3Q9H4B4 646 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 DYNLRB1Q9NP97 96 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 OSGIN1Q9UJX0 560 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 SLC35A3Q9Y2D2 325 aa11.32□□□□□ -0.6
COPB1-209ENST00000533096 CECR9P0C854 216 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 G6PDP11413 515 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 KRT4P19013 534 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 TCN1P20061 433 aaPredicted RBP11.31□□□□□ -0.6
COPB1-209ENST00000533096 CALCRP30988 508 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 HTR3AP46098 478 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 POLR2HP52434 150 aaKnown RBP11.31□□□□□ -0.6
COPB1-209ENST00000533096 NAAAQ02083 359 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 HGFACQ04756 655 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 EMBQ6PCB8 327 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 ANKRD46Q86W74 232 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 IFT20Q8IY31 132 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 POMGNT2Q8NAT1 580 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 MNS1Q8NEH6 495 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 WDR60Q8WVS4 1066 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 BCL2L2Q92843 193 aaPredicted RBP11.31□□□□□ -0.6
COPB1-209ENST00000533096 HPS1Q92902 700 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 TUBGCP3Q96CW5 907 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 DOK1Q99704 481 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 ZNF350Q9GZX5 532 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 TPK1Q9H3S4 243 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 SEC61A2Q9H9S3 476 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 ADPRHL2Q9NX46 363 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 FREM1Q5H8C1 2179 aa11.31□□□□□ -0.6
COPB1-209ENST00000533096 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.3□□□□□ -0.62e-7■■■■■ 27.8
COPB1-209ENST00000533096 OR6C65A6NJZ3 312 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 ZNF587BE7ETH6 402 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 SHBGP04278 402 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 CELA3BP08861 270 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 CXCR1P25024 350 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 GIFP27352 417 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 ALDH3A1P30838 453 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 SELENOPP49908 381 aa11.3□□□□□ -0.6
COPB1-209ENST00000533096 CDH15P55291 814 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms