RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 CEACAM7Q14002 265 aa15.24■□□□□ 0.03
PHRF1-204ENST00000532550 STK11Q15831 433 aa15.24■□□□□ 0.03
PHRF1-204ENST00000532550 SHEQ5VZ18 495 aa15.24■□□□□ 0.03
PHRF1-204ENST00000532550 REEP3Q6NUK4 255 aa15.24■□□□□ 0.03
PHRF1-204ENST00000532550 SERPINA11Q86U17 422 aa15.24■□□□□ 0.03
PHRF1-204ENST00000532550 KRT73Q86Y46 540 aa15.24■□□□□ 0.03
PHRF1-204ENST00000532550 NFKBIDQ8NI38 313 aa15.24■□□□□ 0.03
PHRF1-204ENST00000532550 SLC35B4Q969S0 331 aa15.24■□□□□ 0.03
PHRF1-204ENST00000532550 SPATA5L1Q9BVQ7 753 aa15.24■□□□□ 0.03
PHRF1-204ENST00000532550 TAPBPLQ9BX59 468 aa15.24■□□□□ 0.03
PHRF1-204ENST00000532550 LEF1Q9UJU2 399 aaPredicted RBP15.24■□□□□ 0.03
PHRF1-204ENST00000532550 NDUFAF1Q9Y375 327 aa15.24■□□□□ 0.03
PHRF1-204ENST00000532550 GMEB1Q9Y692 573 aa15.24■□□□□ 0.03
PHRF1-204ENST00000532550 A0A0G2JND7 137 aa15.23■□□□□ 0.03
PHRF1-204ENST00000532550 RAMP1O60894 148 aa15.23■□□□□ 0.03
PHRF1-204ENST00000532550 PLAUP00749 431 aa15.23■□□□□ 0.03
PHRF1-204ENST00000532550 GPX2P18283 190 aa15.23■□□□□ 0.03
PHRF1-204ENST00000532550 GGT1P19440 569 aa15.23■□□□□ 0.03
PHRF1-204ENST00000532550 IGHV1-2P23083 117 aa15.23■□□□□ 0.03
PHRF1-204ENST00000532550 SLC6A2P23975 617 aa15.23■□□□□ 0.03
PHRF1-204ENST00000532550 HOXC12P31275 282 aa15.23■□□□□ 0.03
PHRF1-204ENST00000532550 OR7A5Q15622 319 aa15.23■□□□□ 0.03
PHRF1-204ENST00000532550 OTUD3Q5T2D3 398 aaPredicted RBP15.23■□□□□ 0.03
PHRF1-204ENST00000532550 PAQR6Q6TCH4 344 aa15.23■□□□□ 0.03
PHRF1-204ENST00000532550 SSX8Q7RTT4 187 aa15.23■□□□□ 0.03
PHRF1-204ENST00000532550 P2RY8Q86VZ1 359 aa15.23■□□□□ 0.03
PHRF1-204ENST00000532550 LRRC75A-AS1Q8N1F1 130 aa15.23■□□□□ 0.03
PHRF1-204ENST00000532550 ASB6Q9NWX5 421 aa15.23■□□□□ 0.03
PHRF1-204ENST00000532550 RPS6KB2Q9UBS0 482 aa15.23■□□□□ 0.03
PHRF1-204ENST00000532550 SLC9A8Q9Y2E8 581 aa15.23■□□□□ 0.03
PHRF1-204ENST00000532550 TRBV5-3A0A0A0MS03 114 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 CIB4A0PJX0 185 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 LIPT2A6NK58 231 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 CCT8L1PA6NM43 557 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 ANGPT2O15123 496 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 FRS3O43559 492 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 AKR7A3O95154 331 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 CD3EP07766 207 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 ADSLP30566 484 aaPredicted RBP15.22■□□□□ 0.03
PHRF1-204ENST00000532550 PRKAR1BP31321 381 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 NTF4P34130 210 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 HOXC5Q00444 222 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 SCARB2Q14108 478 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 SLC17A1Q14916 467 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 PPA1Q15181 289 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 RUNDC3AQ59EK9 446 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 TIMM23BQ5SRD1 257 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 NCMAPQ5T1S8 102 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 METTL21CQ5VZV1 264 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 TMEM225Q6GV28 225 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 DLEU7Q6UYE1 221 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 C10orf111Q8N326 155 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 ZNF433Q8N7K0 673 aaPredicted RBP15.22■□□□□ 0.03
PHRF1-204ENST00000532550 TMEM99Q8N816 258 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 WFDC11Q8NEX6 87 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 C3orf49Q96BT1 292 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 ZNF607Q96SK3 696 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 TMEM204Q9BSN7 226 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 TMEM38AQ9H6F2 299 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 UPB1Q9UBR1 384 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 RNF115Q9Y4L5 304 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 FLVCR1Q9Y5Y0 555 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 CADP27708 2225 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 C2CD3Q4AC94 2353 aa15.22■□□□□ 0.03
PHRF1-204ENST00000532550 ZNF469Q96JG9 3925 aaPredicted RBP15.22■□□□□ 0.03
PHRF1-204ENST00000532550 SETD2Q9BYW2 2564 aaPredicted RBP15.22■□□□□ 0.03
PHRF1-204ENST00000532550 HS3ST1O14792 307 aa15.21■□□□□ 0.03
PHRF1-204ENST00000532550 CLOCKO15516 846 aa15.21■□□□□ 0.03
PHRF1-204ENST00000532550 SERPINB7O75635 380 aa15.21■□□□□ 0.03
PHRF1-204ENST00000532550 FOSL1P15407 271 aa15.21■□□□□ 0.03
PHRF1-204ENST00000532550 COX5AP20674 150 aa15.21■□□□□ 0.03
PHRF1-204ENST00000532550 RIPPLY3P57055 190 aa15.21■□□□□ 0.03
PHRF1-204ENST00000532550 FAPQ12884 760 aa15.21■□□□□ 0.03
PHRF1-204ENST00000532550 C1orf140Q5VVS0 124 aa15.21■□□□□ 0.03
PHRF1-204ENST00000532550 CASP12Q6UXS9 341 aa15.21■□□□□ 0.03
PHRF1-204ENST00000532550 LSRQ86X29 649 aaPredicted RBP15.21■□□□□ 0.03
PHRF1-204ENST00000532550 ZNF611Q8N823 705 aa15.21■□□□□ 0.03
PHRF1-204ENST00000532550 STK35Q8TDR2 534 aa15.21■□□□□ 0.03
PHRF1-204ENST00000532550 TSPEARQ8WU66 669 aa15.21■□□□□ 0.03
PHRF1-204ENST00000532550 TMEM171Q8WVE6 324 aa15.21■□□□□ 0.03
PHRF1-204ENST00000532550 AKAP1Q92667 903 aaKnown RBP eCLIP15.21■□□□□ 0.03
PHRF1-204ENST00000532550 SF3B5Q9BWJ5 86 aaKnown RBP15.21■□□□□ 0.03
PHRF1-204ENST00000532550 IKZF5Q9H5V7 419 aa15.21■□□□□ 0.03
PHRF1-204ENST00000532550 ADPRHL2Q9NX46 363 aa15.21■□□□□ 0.03
PHRF1-204ENST00000532550 VPS13CQ709C8 3753 aa15.21■□□□□ 0.02
PHRF1-204ENST00000532550 PRORSD1PA6NEY8 169 aa15.2■□□□□ 0.02
PHRF1-204ENST00000532550 OR5H1A6NKK0 313 aa15.2■□□□□ 0.02
PHRF1-204ENST00000532550 ELOA3DA6NLF2 546 aaPredicted RBP15.2■□□□□ 0.02
PHRF1-204ENST00000532550 RAD51DO75771 328 aa15.2■□□□□ 0.02
PHRF1-204ENST00000532550 VAMP5O95183 116 aa15.2■□□□□ 0.02
PHRF1-204ENST00000532550 ELOA3BQ3SY89 546 aa15.2■□□□□ 0.02
PHRF1-204ENST00000532550 OR7E24Q6IFN5 339 aa15.2■□□□□ 0.02
PHRF1-204ENST00000532550 DHRS4L2Q6PKH6 230 aa15.2■□□□□ 0.02
PHRF1-204ENST00000532550 DHDDSQ86SQ9 333 aa15.2■□□□□ 0.02
PHRF1-204ENST00000532550 ATG4DQ86TL0 474 aaPredicted RBP15.2■□□□□ 0.02
PHRF1-204ENST00000532550 GPAT4Q86UL3 456 aa15.2■□□□□ 0.02
PHRF1-204ENST00000532550 DPP10Q8N608 796 aa15.2■□□□□ 0.02
PHRF1-204ENST00000532550 HIPK4Q8NE63 616 aa15.2■□□□□ 0.02
PHRF1-204ENST00000532550 BHLHE22Q8NFJ8 381 aaPredicted RBP15.2■□□□□ 0.02
PHRF1-204ENST00000532550 ELOA3Q8NG57 546 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms