RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 HCRTR1O43613 425 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 THY1P04216 161 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 OR8U8P0C7N1 319 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 RNH1P13489 461 aaKnown RBP2.21□□□□□ -2.06
CD44-234ENST00000531873 ZP3P21754 424 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 HOXD10P28358 340 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 CD1CP29017 333 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 PRRX1P54821 245 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 PKNOX1P55347 436 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 MRPL28Q13084 256 aaKnown RBP2.21□□□□□ -2.06
CD44-234ENST00000531873 C15orf32Q32M92 178 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 NSUN5P1Q3KNT7 163 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 ATAD3CQ5T2N8 411 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 OR52E8Q6IFG1 317 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 FRA10AC1Q70Z53 315 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 MTURNQ8N3F0 131 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 ZNF485Q8NCK3 441 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.21□□□□□ -2.06
CD44-234ENST00000531873 CXorf40BQ96DE9 158 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 SLC25A38Q96DW6 304 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 PLEKHA8Q96JA3 519 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 ZNF641Q96N77 438 aaPredicted RBP2.21□□□□□ -2.06
CD44-234ENST00000531873 CNN2Q99439 309 aaKnown RBP2.21□□□□□ -2.06
CD44-234ENST00000531873 KIR2DL4Q99706 377 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 GAL3ST1Q99999 423 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 KRTAP4-3Q9BYR4 195 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 NMUR2Q9GZQ4 415 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 PPA2Q9H2U2 334 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 Q9H3A6 140 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 RBKSQ9H477 322 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 REEP4Q9H6H4 257 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 NIPAL2Q9H841 368 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 RAB20Q9NX57 234 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 THUMPD1Q9NXG2 353 aaKnown RBP2.21□□□□□ -2.06
CD44-234ENST00000531873 KLHL28Q9NXS3 571 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 SLC2A8Q9NY64 477 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 HOXC10Q9NYD6 342 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 BFARQ9NZS9 450 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 UBQLN1Q9UMX0 589 aaKnown RBP2.21□□□□□ -2.06
CD44-234ENST00000531873 ABCG2Q9UNQ0 655 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 KCNIP3Q9Y2W7 256 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 TMED5Q9Y3A6 229 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.21□□□□□ -2.06
CD44-234ENST00000531873 CLSPNQ9HAW4 1339 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 IQANK1A0A1B0GTG1 560 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 TUBAL3A6NHL2 446 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 A8MXQ7 604 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 GOLGA8SH3BPF8 625 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 WWP2O00308 870 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 RNF13O43567 381 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 CTAG2O75638 210 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 GAS8-AS1O95177 125 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 C1orf105O95561 183 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 OXSR1O95747 527 aaPredicted RBP2.2□□□□□ -2.06
CD44-234ENST00000531873 IGHV3-48P01763 117 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 IGHV3-23P01764 117 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 P04436 131 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 FGF4P08620 206 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 ZNF43P17038 809 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 KITLGP21583 273 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 GALP22466 123 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 CCNCP24863 283 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 CALCRP30988 508 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 CASP14P31944 242 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 UGT1A3P35503 534 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 GYG1P46976 350 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 MEOX2P50222 304 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 CHRNB3Q05901 458 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 SLC10A7Q0GE19 358 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 ASPHQ12797 758 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 OR5I1Q13606 314 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 OXA1LQ15070 435 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 DGUOKQ16854 277 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 LRRC36Q1X8D7 754 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 MICBQ29980 383 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 GSG1Q2KHT4 349 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 UTF1Q5T230 341 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 C1orf185Q5T7R7 199 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 TMEM107Q6UX40 140 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 UNQ9370/PRO34162Q6UXP9 181 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 C19orf35Q6ZS72 473 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 Q6ZSR3 168 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 SLC25A48Q6ZT89 311 aaKnown RBP2.2□□□□□ -2.06
CD44-234ENST00000531873 ACOT7LQ6ZUV0 252 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 PRSS41Q7RTY9 318 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 RDH10Q8IZV5 341 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 TPRX1Q8N7U7 411 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 OR4K14Q8NGD5 310 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 MRAPQ8TCY5 172 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 SETD7Q8WTS6 366 aaKnown RBP2.2□□□□□ -2.06
CD44-234ENST00000531873 ELMO1Q92556 727 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 FGGYQ96C11 551 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 NUS1Q96E22 293 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 SERAC1Q96JX3 654 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 PGLYRP4Q96LB8 373 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 MBOAT4Q96T53 435 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 ZNF184Q99676 751 aaPredicted RBP2.2□□□□□ -2.06
CD44-234ENST00000531873 MAPKAP1Q9BPZ7 522 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 MRPL45Q9BRJ2 306 aaKnown RBP2.2□□□□□ -2.06
CD44-234ENST00000531873 DEFB126Q9BYW3 111 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms