RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 TMEM99Q8N816 258 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 C1orf162Q8NEQ5 155 aaPredicted RBP8.03□□□□□ -1.12
NEDD8-206ENST00000531430 PMM1Q92871 262 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 RAB8BQ92930 207 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 MOAP1Q96BY2 351 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 FAHD2AQ96GK7 314 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 SLC35G5Q96KT7 338 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 FCRL1Q96LA6 429 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 PPP3R2Q96LZ3 170 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 DUSP26Q9BV47 211 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 CCDC106Q9BWC9 280 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 NMUR2Q9GZQ4 415 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 OR51I1Q9H343 314 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 TPK1Q9H3S4 243 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 PLK3Q9H4B4 646 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 PCDHB10Q9UN67 800 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 PCDHGB4Q9UN71 923 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 TRAPPC4Q9Y296 219 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 WDR45Q9Y484 360 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 PCDHB14Q9Y5E9 798 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 DNAJC15Q9Y5T4 150 aa8.03□□□□□ -1.12
NEDD8-206ENST00000531430 TMEM72A0PK05 275 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 OR6C65A6NJZ3 312 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 CLDN24A6NM45 220 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 TMEM233B4DJY2 109 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 B4DSR2 109 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 ZNF587BE7ETH6 402 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 PDLIM1O00151 329 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 ETV2O00321 342 aaPredicted RBP8.02□□□□□ -1.13
NEDD8-206ENST00000531430 COPEO14579 308 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 PIP5K1BO14986 540 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 PLIN3O60664 434 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 BCAS1O75363 584 aaPredicted RBP8.02□□□□□ -1.13
NEDD8-206ENST00000531430 AK1P00568 194 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 IMPDH2P12268 514 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 FKBP2P26885 142 aaKnown RBP8.02□□□□□ -1.13
NEDD8-206ENST00000531430 TACR3P29371 465 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 PGM1P36871 562 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 CAPZA2P47755 286 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 CLK1P49759 484 aaKnown RBP8.02□□□□□ -1.13
NEDD8-206ENST00000531430 HBA1P69905 142 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 NAAAQ02083 359 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 NPRL3Q12980 569 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 OR7A5Q15622 319 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 ARHGAP11BQ3KRB8 267 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 FAM153CQ494X1 144 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 TNFAIP8L2Q6P589 184 aaPredicted RBP8.02□□□□□ -1.13
NEDD8-206ENST00000531430 UGT2A3Q6UWM9 527 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 ZCCHC23Q6ZST2 131 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 ABHD12BQ7Z5M8 362 aaPredicted RBP8.02□□□□□ -1.13
NEDD8-206ENST00000531430 PEG10Q86TG7 708 aaKnown RBP8.02□□□□□ -1.13
NEDD8-206ENST00000531430 CLECL1Q8IZS7 167 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 NATD1Q8N6N6 113 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 POMGNT2Q8NAT1 580 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 FNDC5Q8NAU1 212 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 OR4F15Q8NGB8 312 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 OR1K1Q8NGR3 316 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 SFXN5Q8TD22 340 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 TWIST2Q8WVJ9 160 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 HPS1Q92902 700 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 ZG16BQ96DA0 208 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 ZMYND19Q96E35 227 aaPredicted RBP8.02□□□□□ -1.13
NEDD8-206ENST00000531430 ZNF385AQ96PM9 386 aaKnown RBP8.02□□□□□ -1.13
NEDD8-206ENST00000531430 GATA5Q9BWX5 397 aaPredicted RBP8.02□□□□□ -1.13
NEDD8-206ENST00000531430 SERHL2Q9H4I8 314 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.02□□□□□ -1.13
NEDD8-206ENST00000531430 HIF1ANQ9NWT6 349 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 ADPRHL2Q9NX46 363 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 PSMC3IPQ9P2W1 217 aaPredicted RBP8.02□□□□□ -1.13
NEDD8-206ENST00000531430 SLC35A3Q9Y2D2 325 aa8.02□□□□□ -1.13
NEDD8-206ENST00000531430 A0A0A6YYJ9 748 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 RNF103-CHMP3A0A140T963 221 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 ZC3H12DA2A288 527 aaKnown RBP8.01□□□□□ -1.13
NEDD8-206ENST00000531430 SLCO1B7G3V0H7 640 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 TRIM77I1YAP6 450 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 AP3D1O14617 1153 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 RIPK2O43353 540 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 DNPH1O43598 174 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 LYPLA1O75608 230 aaPredicted RBP8.01□□□□□ -1.13
NEDD8-206ENST00000531430 TACSTD2P09758 323 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 CECR9P0C854 216 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 CXCR1P25024 350 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 GIFP27352 417 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 CALCRP30988 508 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 HTR3AP46098 478 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 SELENOPP49908 381 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 PPOXP50336 477 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 POLR2HP52434 150 aaKnown RBP8.01□□□□□ -1.13
NEDD8-206ENST00000531430 DVL1P1P54792 670 aaPredicted RBP8.01□□□□□ -1.13
NEDD8-206ENST00000531430 KCNJ10P78508 379 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 HPCAP84074 193 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 SLC17A1Q14916 467 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 EFNB3Q15768 340 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 ZSWIM7Q19AV6 140 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 ATP6AP1LQ52LC2 224 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 KANK2Q63ZY3 851 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 OR4F3Q6IEY1 312 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 TYW3Q6IPR3 259 aaKnown RBP8.01□□□□□ -1.13
NEDD8-206ENST00000531430 NIPAL3Q6P499 406 aa8.01□□□□□ -1.13
NEDD8-206ENST00000531430 TRMT10CQ7L0Y3 403 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms