RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ZNF556Q9HAH1 456 aa17.16■□□□□ 0.34
SMPD1-205ENST00000531303 MGAT4BQ9UQ53 548 aa17.16■□□□□ 0.34
SMPD1-205ENST00000531303 EFCAB9A8MZ26 197 aa17.15■□□□□ 0.34
SMPD1-205ENST00000531303 H0YC42 278 aa17.15■□□□□ 0.34
SMPD1-205ENST00000531303 ERVH48-1M5A8F1 160 aa17.15■□□□□ 0.34
SMPD1-205ENST00000531303 CRYABP02511 175 aaKnown RBP17.15■□□□□ 0.34
SMPD1-205ENST00000531303 SAGP10523 405 aaPredicted RBP17.15■□□□□ 0.34
SMPD1-205ENST00000531303 ANXA8P13928 327 aa17.15■□□□□ 0.34
SMPD1-205ENST00000531303 BMP7P18075 431 aa17.15■□□□□ 0.34
SMPD1-205ENST00000531303 TPD52P55327 224 aaPredicted RBP17.15■□□□□ 0.34
SMPD1-205ENST00000531303 CLDN20P56880 219 aa17.15■□□□□ 0.34
SMPD1-205ENST00000531303 RAC1P63000 192 aa17.15■□□□□ 0.34
SMPD1-205ENST00000531303 SRYQ05066 204 aa17.15■□□□□ 0.34
SMPD1-205ENST00000531303 INAQ16352 499 aa17.15■□□□□ 0.34
SMPD1-205ENST00000531303 C1orf94Q6P1W5 598 aa17.15■□□□□ 0.34
SMPD1-205ENST00000531303 FAHD1Q6P587 224 aa17.15■□□□□ 0.34
SMPD1-205ENST00000531303 LRRC17Q8N6Y2 441 aa17.15■□□□□ 0.34
SMPD1-205ENST00000531303 NEIL3Q8TAT5 605 aa17.15■□□□□ 0.34
SMPD1-205ENST00000531303 SLC25A43Q8WUT9 341 aaPredicted RBP17.15■□□□□ 0.34
SMPD1-205ENST00000531303 ABTB1Q969K4 478 aaPredicted RBP17.15■□□□□ 0.34
SMPD1-205ENST00000531303 MOGAT1Q96PD6 335 aa17.15■□□□□ 0.34
SMPD1-205ENST00000531303 RBM4BQ9BQ04 359 aaKnown RBP17.15■□□□□ 0.34
SMPD1-205ENST00000531303 RBM4Q9BWF3 364 aaKnown RBP17.15■□□□□ 0.34
SMPD1-205ENST00000531303 OSBPL10Q9BXB5 764 aa17.15■□□□□ 0.34
SMPD1-205ENST00000531303 TMEM5Q9Y2B1 443 aa17.15■□□□□ 0.34
SMPD1-205ENST00000531303 PRRC2CQ9Y520 2896 aaKnown RBP17.14■□□□□ 0.33
SMPD1-205ENST00000531303 SPTA1P02549 2419 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 ITPR1Q14643 2758 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 ARRDC5A6NEK1 342 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 ZNHIT1O43257 154 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 NPIPB7O75200 414 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 SFTPCP11686 197 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 CHMP24386 653 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 MAP2K6P52564 334 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 CTBP2P56545 445 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 PPP2R2BQ00005 443 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 HSF1Q00613 529 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 LTBQ06643 244 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 KLRB1Q12918 225 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 MYBPHQ13203 477 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 OR7A5Q15622 319 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 PPP4R4Q6NUP7 873 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 PCSK4Q6UW60 755 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 SIAH3Q8IW03 269 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 PSD2Q9BQI7 771 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 PTDSS2Q9BVG9 487 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 KRT84Q9NSB2 600 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 AP4B1Q9Y6B7 739 aa17.14■□□□□ 0.33
SMPD1-205ENST00000531303 EIF1AYO14602 144 aaKnown RBP17.13■□□□□ 0.33
SMPD1-205ENST00000531303 CDC42EP2O14613 210 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 TNFSF11O14788 317 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 OR7A10O76100 309 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 ADAP00813 363 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 ALPLP05186 524 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 IMPDH2P12268 514 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 ZNF26P17031 533 aaPredicted RBP17.13■□□□□ 0.33
SMPD1-205ENST00000531303 IGFBP5P24593 272 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 IDUAP35475 653 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 ALDH3A2P51648 485 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 SUCLG1P53597 346 aaKnown RBP17.13■□□□□ 0.33
SMPD1-205ENST00000531303 OR2B6P58173 313 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 C3AR1Q16581 482 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 ZNF74Q16587 644 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 ZIK1Q3SY52 487 aaPredicted RBP17.13■□□□□ 0.33
SMPD1-205ENST00000531303 GXYLT1Q4G148 440 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 PRR30Q53SZ7 412 aaPredicted RBP17.13■□□□□ 0.33
SMPD1-205ENST00000531303 OR13C2Q8NGS9 318 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 KLHL15Q96M94 604 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 TACO1Q9BSH4 297 aaKnown RBP17.13■□□□□ 0.33
SMPD1-205ENST00000531303 DGCR6LQ9BY27 220 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 POTEKPQ9BYX7 375 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 UCK2Q9BZX2 261 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 VCX3BQ9H321 246 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 PAPOLBQ9NRJ5 636 aaKnown RBP17.13■□□□□ 0.33
SMPD1-205ENST00000531303 SPRR3Q9UBC9 169 aa17.13■□□□□ 0.33
SMPD1-205ENST00000531303 TMEFF2Q9UIK5 374 aaPredicted RBP17.13■□□□□ 0.33
SMPD1-205ENST00000531303 A0A0J9YW62 118 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 UNC119BA6NIH7 251 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 GJE1A6NN92 205 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 LINC01387J3KSC0 135 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 BGLAPP02818 100 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 GSSP48637 474 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 TSPAN31Q12999 210 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 FAM69AQ5T7M9 428 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 KDM4DQ6B0I6 523 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 KLHL17Q6TDP4 642 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 C5orf46Q6UWT4 87 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 TMPRSS11FQ6ZWK6 438 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 SLC46A3Q7Z3Q1 461 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 OR51A7Q8NH64 312 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 TAPBPLQ9BX59 468 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 RASSF4Q9H2L5 321 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 VCXQ9H320 206 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 NANSQ9NR45 359 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 ORC6Q9Y5N6 252 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 TRAV27A0A087WT01 109 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 SULT2B1O00204 365 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 KLF4O43474 513 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 HCN1O60741 890 aa17.12■□□□□ 0.33
SMPD1-205ENST00000531303 SOX14O95416 240 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms