RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 ERVK-19Q9WJR5 959 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 SF3B6Q9Y3B4 125 aaKnown RBP5.1□□□□□ -1.59
PCF11-205ENST00000530906 ZNF337Q9Y3M9 751 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 CLDN16Q9Y5I7 305 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 NOX1Q9Y5S8 564 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 SPIN1Q9Y657 262 aaPredicted RBP5.1□□□□□ -1.59
PCF11-205ENST00000530906 CLCA3PQ9Y6N3 262 aa5.1□□□□□ -1.59
PCF11-205ENST00000530906 MKI67P46013 3256 aaKnown RBP5.1□□□□□ -1.59
PCF11-205ENST00000530906 IGHV5-51A0A0C4DH38 117 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 CENPVL1A0A0U1RR11 272 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 A0A1B0GTQ1 180 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 TCRBV16S1A1N1A0A5B0 115 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 DAPL1A0PJW8 107 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 HSPB2A8KAH6 182 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 C17orf105B2RV13 164 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 H3BMH7 237 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 HCRTR1O43613 425 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 PIP5K1CO60331 668 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 CDC40O60508 579 aaKnown RBP eCLIP5.09□□□□□ -1.59
PCF11-205ENST00000530906 FOXD2O60548 495 aaPredicted RBP5.09□□□□□ -1.59
PCF11-205ENST00000530906 EIF4E2O60573 245 aaKnown RBP5.09□□□□□ -1.59
PCF11-205ENST00000530906 OR7A10O76100 309 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 SERPINA3P01011 423 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 HPXP02790 462 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 IGKV3-11P04433 115 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 HNRNPCP07910 306 aaKnown RBP eCLIP5.09□□□□□ -1.59
PCF11-205ENST00000530906 ADRA2AP08913 450 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 ZGLP1P0C6A0 271 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 GKN3PP0CG01 181 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 UBL4AP11441 157 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 PRG2P13727 222 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 MAKP20794 623 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 FBLP22087 321 aaKnown RBP5.09□□□□□ -1.59
PCF11-205ENST00000530906 SLC2A5P22732 501 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 SDC2P34741 201 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 HOXD12P35452 270 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 RPS19P39019 145 aaKnown RBP5.09□□□□□ -1.59
PCF11-205ENST00000530906 MTNR1BP49286 362 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 CENPAP49450 140 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 PNLIPRP2P54317 469 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 GFERP55789 205 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 SLC37A1P57057 533 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 RPS4XP62701 263 aaKnown RBP5.09□□□□□ -1.59
PCF11-205ENST00000530906 HOXC5Q00444 222 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 ACY1Q03154 408 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 RIN1Q13671 783 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 ATP1A4Q13733 1029 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 HSPB2Q16082 182 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 DEFB133Q30KQ1 61 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 CCDC58Q4VC31 144 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 CLEC12AQ5QGZ9 265 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 FNDC7Q5VTL7 733 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 HLA-DQA1Q5Y7H0 255 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 GPR139Q6DWJ6 353 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 XKRXQ6PP77 449 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 NPSR1Q6W5P4 371 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 WDR88Q6ZMY6 472 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 KCTD20Q7Z5Y7 419 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 RABEPKQ7Z6M1 372 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 HMGN2P46Q86SG4 172 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 ZNF761Q86XN6 746 aaPredicted RBP5.09□□□□□ -1.59
PCF11-205ENST00000530906 LYSMD2Q8IV50 215 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 MISPQ8IVT2 679 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 TMEM151BQ8IW70 566 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 MRPL41Q8IXM3 137 aaKnown RBP5.09□□□□□ -1.59
PCF11-205ENST00000530906 TMEFF1Q8IYR6 380 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 PARP16Q8N5Y8 322 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 ZNF614Q8N883 585 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 GDPD1Q8N9F7 314 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 TEX19Q8NA77 164 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 SLC37A3Q8NCC5 494 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 SIMC1Q8NDZ2 872 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 PLPP5Q8NEB5 264 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 OR13C2Q8NGS9 318 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 CHAC2Q8WUX2 184 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 THRSPQ92748 146 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 NAT6Q93015 286 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 ABTB1Q969K4 478 aaPredicted RBP5.09□□□□□ -1.59
PCF11-205ENST00000530906 C1GALT1C1Q96EU7 318 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 SENP5Q96HI0 755 aaPredicted RBP5.09□□□□□ -1.59
PCF11-205ENST00000530906 LCORQ96JN0 433 aaPredicted RBP5.09□□□□□ -1.59
PCF11-205ENST00000530906 Q96M66 194 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 PTCHD1Q96NR3 888 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 SNX18Q96RF0 628 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 SECISBP2Q96T21 854 aaKnown RBP5.09□□□□□ -1.59
PCF11-205ENST00000530906 TEAD3Q99594 435 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 CNPPD1Q9BV87 410 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 LAT2Q9GZY6 243 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 MIR1-1HGQ9H1L0 117 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 ZNF768Q9H5H4 540 aaKnown RBP5.09□□□□□ -1.59
PCF11-205ENST00000530906 TBC1D17Q9HA65 648 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 ZNF304Q9HCX3 659 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 MEPEQ9NQ76 525 aaPredicted RBP5.09□□□□□ -1.59
PCF11-205ENST00000530906 STARD5Q9NSY2 213 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 FBXO34Q9NWN3 711 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 BABAM2Q9NXR7 383 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 FLRT3Q9NZU0 649 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 COPS7AQ9UBW8 275 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 MOKQ9UQ07 419 aa5.09□□□□□ -1.59
PCF11-205ENST00000530906 GPR52Q9Y2T5 361 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms