RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 PHF11Q9UIL8 331 aa3.36□□□□□ -1.87
C11orf88-204ENST00000529661 PDE10AQ9Y233 779 aa3.36□□□□□ -1.87
C11orf88-204ENST00000529661 FLVCR1Q9Y5Y0 555 aa3.36□□□□□ -1.87
C11orf88-204ENST00000529661 LINC00854A0A1B0GVQ3 168 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 KLLNB2CW77 178 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 F5H6K3 240 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 WRBO00258 174 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 WWP2O00308 870 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 POLR2DO15514 142 aaKnown RBP3.35□□□□□ -1.87
C11orf88-204ENST00000529661 RNF113AO15541 343 aaKnown RBP3.35□□□□□ -1.87
C11orf88-204ENST00000529661 OR10H3O60404 316 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 PFKFB2O60825 505 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 PAHP00439 452 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 PGK1P00558 417 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 KRTAP1-4P0C5Y4 121 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 P0C879 139 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 GCAP28676 217 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 FGF9P31371 208 aaPredicted RBP3.35□□□□□ -1.87
C11orf88-204ENST00000529661 EPHX2P34913 555 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 GCKP35557 465 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 RPL13AP40429 203 aaKnown RBP3.35□□□□□ -1.87
C11orf88-204ENST00000529661 PTGDSP41222 190 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 MAP3K8P41279 467 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 MAGEA8P43361 318 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 OR1G1P47890 313 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 DUSP3P51452 185 aaPredicted RBP3.35□□□□□ -1.87
C11orf88-204ENST00000529661 RIPK4P57078 832 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 KLRC3Q07444 240 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 SLC10A7Q0GE19 358 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 IL18Q14116 193 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 STK11Q15831 433 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 TRIM16LQ309B1 348 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 PAGE2BQ5JRK9 111 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 PDZK1Q5T2W1 519 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 ZNF658Q5TYW1 1059 aaPredicted RBP3.35□□□□□ -1.87
C11orf88-204ENST00000529661 PRAMEF5Q5TYX0 476 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 PRAMEF6Q5VXH4 476 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 CARD17Q5XLA6 110 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 OR2L13Q8N349 312 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 ATP6V0D2Q8N8Y2 350 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 MFSD9Q8NBP5 474 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 OR9K2Q8NGE7 335 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 MAIP1Q8WWC4 291 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 UBE2E3Q969T4 207 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 RPRD1AQ96P16 312 aaPredicted RBP3.35□□□□□ -1.87
C11orf88-204ENST00000529661 SLC38A2Q96QD8 506 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 MTMR9Q96QG7 549 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 NUP58Q9BVL2 599 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 DEFB126Q9BYW3 111 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 ONECUT1Q9UBC0 465 aa3.35□□□□□ -1.87
C11orf88-204ENST00000529661 KIF2AO00139 706 aaPredicted RBP3.34□□□□□ -1.87
C11orf88-204ENST00000529661 FOXE1O00358 373 aaPredicted RBP3.34□□□□□ -1.87
C11orf88-204ENST00000529661 POLR3GO15318 223 aaPredicted RBP3.34□□□□□ -1.87
C11orf88-204ENST00000529661 TIMM8AO60220 97 aaPredicted RBP3.34□□□□□ -1.87
C11orf88-204ENST00000529661 LYPLA1O75608 230 aaPredicted RBP3.34□□□□□ -1.87
C11orf88-204ENST00000529661 SERF1AO75920 110 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 KRT14P02533 472 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 SEMG1P04279 462 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 RALBP11234 206 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 MX1P20591 662 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 COX5AP20674 150 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 VDAC1P21796 283 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 CD9P21926 228 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 GNA11P29992 359 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 PRKAR2BP31323 418 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 UGT1A3P35503 534 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 MECOMQ03112 1051 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 CHRNB3Q05901 458 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 BST1Q10588 318 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 MAB21L1Q13394 359 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 DOC2AQ14183 400 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 KIAA0040Q15053 153 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 FRA10AC1Q70Z53 315 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 DHDDSQ86SQ9 333 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 PAQR7Q86WK9 346 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 ZNF677Q86XU0 584 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 ECHDC2Q86YB7 292 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 SLC35F2Q8IXU6 374 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 ZBED8Q8IZ13 594 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 ZNF525Q8N782 197 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 ZNF321PQ8N8H1 164 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 MNS1Q8NEH6 495 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 OR8K3Q8NH51 312 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 DNAJA4Q8WW22 397 aaPredicted RBP3.34□□□□□ -1.87
C11orf88-204ENST00000529661 STARD8Q92502 1023 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 FGGYQ96C11 551 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 C19orf60Q96EN9 201 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 Q9H3A6 140 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 XKR8Q9H6D3 395 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 SGK2Q9HBY8 427 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 POLE4Q9NR33 117 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 VNN3Q9NY84 501 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 KIAA1257Q9ULG3 409 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 MOKQ9UQ07 419 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 PIGLQ9Y2B2 252 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 PLLPQ9Y342 182 aa3.34□□□□□ -1.87
C11orf88-204ENST00000529661 IGHV1OR15-1A0A075B7D0 117 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 SMIM28A0A1B0GU29 152 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 A0A1B0GUS0 222 aa3.33□□□□□ -1.88
C11orf88-204ENST00000529661 ARHGEF35A5YM69 484 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms