RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 ARL5BQ96KC2 179 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 FCRL1Q96LA6 429 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 OR7D2Q96RA2 312 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 SDF2Q99470 211 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 FMO2Q99518 471 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 PRPF18Q99633 342 aaKnown RBP7.82□□□□□ -1.16
VPS11-203ENST00000529545 CCDC106Q9BWC9 280 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 RBM4Q9BWF3 364 aaKnown RBP7.82□□□□□ -1.16
VPS11-203ENST00000529545 MOV10Q9HCE1 1003 aaKnown RBP7.82□□□□□ -1.16
VPS11-203ENST00000529545 DYNLRB1Q9NP97 96 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 CTPS2Q9NRF8 586 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 ATAD3AQ9NVI7 634 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 TMEM45AQ9NWC5 275 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 ATP6V1HQ9UI12 483 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 FIS1Q9Y3D6 152 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 GRIP1Q9Y3R0 1128 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 FLVCR1Q9Y5Y0 555 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 IGHV1-18A0A0C4DH31 117 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 TMEM89A2RUT3 159 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 hCG_2039718K7EN88 272 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 AZIN1O14977 448 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 SCAMP2O15127 329 aaKnown RBP7.81□□□□□ -1.16
VPS11-203ENST00000529545 SKAP2O75563 359 aaPredicted RBP7.81□□□□□ -1.16
VPS11-203ENST00000529545 BCKDHAP12694 445 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 CCNA2P20248 432 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 NPR2P20594 1047 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 RYKP34925 604 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 HTR3AP46098 478 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 H3F3AP84243 136 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 NAAAQ02083 359 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 CKAP4Q07065 602 aaKnown RBP7.81□□□□□ -1.16
VPS11-203ENST00000529545 CCNIQ14094 377 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 HIKESHIQ53FT3 197 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 DEF8Q6ZN54 512 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 AAED1Q7RTV5 226 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 C16orf62Q7Z3J2 963 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 OR7A2PQ8NGA2 310 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 PSMA8Q8TAA3 256 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 IFT81Q8WYA0 676 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 DDIT4LQ96D03 193 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 ANKRD27Q96NW4 1050 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 OR11A1Q9GZK7 315 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 EXD2Q9NVH0 621 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 GPATCH2Q9NW75 528 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 MKLN1Q9UL63 735 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 PCDHB10Q9UN67 800 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 PCDHGB4Q9UN71 923 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 SLC35A3Q9Y2D2 325 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 PTGDR2Q9Y5Y4 395 aa7.81□□□□□ -1.16
VPS11-203ENST00000529545 SH3PXD2BA1X283 911 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 ZNF587BE7ETH6 402 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 G3V2L1 256 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 GLRA3O75311 464 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 UGT2B17O75795 530 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 URI1O94763 535 aaPredicted RBP7.8□□□□□ -1.16
VPS11-203ENST00000529545 C6orf47O95873 294 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 LINC00032P0C843 101 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 LAMP1P11279 417 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 MATN1P21941 496 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 SOAT1P35610 550 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 LIMS1P48059 325 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 KHKP50053 298 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 DNAJB13P59910 316 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 IL1RL1Q01638 556 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 SLC17A1Q14916 467 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 ADRM1Q16186 407 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 C3orf36Q3SXR2 165 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 TBRG1Q3YBR2 411 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 FAM153CQ494X1 144 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 ATAD3BQ5T9A4 648 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 LIPMQ5VYY2 423 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 ANKRD16Q6P6B7 361 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 PAQR6Q6TCH4 344 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 RNF165Q6ZSG1 346 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 USP43Q70EL4 1123 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 ZNF572Q7Z3I7 529 aaPredicted RBP7.8□□□□□ -1.16
VPS11-203ENST00000529545 SPATA21Q7Z572 469 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 PEG10Q86TG7 708 aaKnown RBP7.8□□□□□ -1.16
VPS11-203ENST00000529545 ADGRG3Q86Y34 549 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 DDIASQ8IXT1 998 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 SVOPLQ8N434 492 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 CCDC63Q8NA47 563 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 NUP37Q8NFH4 326 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 OR5D16Q8NGK9 328 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 OR2T11Q8NH01 316 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 OIT3Q8WWZ8 545 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 TMEM45BQ96B21 275 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 TMEM186Q96B77 213 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 AURKBQ96GD4 344 aaPredicted RBP7.8□□□□□ -1.16
VPS11-203ENST00000529545 BOD1Q96IK1 185 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 ZNF317Q96PQ6 595 aaPredicted RBP7.8□□□□□ -1.16
VPS11-203ENST00000529545 ZNF442Q9H7R0 627 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 HIF1ANQ9NWT6 349 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 MGAM2Q2M2H8 2515 aa7.8□□□□□ -1.16
VPS11-203ENST00000529545 TMED7-TICAM2A0A0A6YYA0 188 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 LSM1O15116 133 aaKnown RBP7.79□□□□□ -1.16
VPS11-203ENST00000529545 ZNF208O43345 1280 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 FCMRO60667 390 aa7.79□□□□□ -1.16
VPS11-203ENST00000529545 LYPLA1O75608 230 aaPredicted RBP7.79□□□□□ -1.16
VPS11-203ENST00000529545 RGS9O75916 674 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms