RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 CHMP1BQ7LBR1 199 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 P4HA3Q7Z4N8 544 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 HMGN2P46Q86SG4 172 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 LILRA2Q8N149 483 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 ZNF619Q8N2I2 560 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 ZNF614Q8N883 585 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 ANKFN1Q8N957 763 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 FAM71CQ8NEG0 241 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 OR5W2Q8NH69 310 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 OR10D3Q8NH80 312 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 OR2V1Q8NHB1 315 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 RFWD2Q8NHY2 731 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 PNPT1Q8TCS8 783 aaKnown RBP7.54□□□□□ -1.2
SSBP3-212ENST00000528930 DYDC1Q8WWB3 177 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 GTF2H4Q92759 462 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 FAM46AQ96IP4 442 aaKnown RBP7.54□□□□□ -1.2
SSBP3-212ENST00000528930 TRNT1Q96Q11 434 aaKnown RBP7.54□□□□□ -1.2
SSBP3-212ENST00000528930 RAB3IPQ96QF0 476 aaPredicted RBP7.54□□□□□ -1.2
SSBP3-212ENST00000528930 THUMPD3Q9BV44 507 aaKnown RBP7.54□□□□□ -1.2
SSBP3-212ENST00000528930 BEX2Q9BXY8 128 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 PAIP1Q9H074 479 aaKnown RBP7.54□□□□□ -1.2
SSBP3-212ENST00000528930 QRSL1Q9H0R6 528 aaKnown RBP7.54□□□□□ -1.2
SSBP3-212ENST00000528930 SLC38A1Q9H2H9 487 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 TMEM185BQ9H7F4 350 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 TPT1P8Q9HAU6 139 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 LIPT1Q9Y234 373 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 WDR45Q9Y484 360 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 CLDN24A6NM45 220 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 A8MXE2 369 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 EEF1E1-BLOC1S5C9J1V9 151 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 TNFSF11O14788 317 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 EEF1E1O43324 174 aaKnown RBP7.53□□□□□ -1.2
SSBP3-212ENST00000528930 CXCL13O43927 109 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 SNX3O60493 162 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 ADAM11O75078 769 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 KRT75O95678 551 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 NUDT14O95848 222 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 FPR1P21462 350 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 RPS4Y1P22090 263 aaKnown RBP7.53□□□□□ -1.2
SSBP3-212ENST00000528930 ELK4P28324 431 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 EEF1A1P68104 462 aaKnown RBP7.53□□□□□ -1.2
SSBP3-212ENST00000528930 KCNJ10P78508 379 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 CBFBQ13951 182 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 QPRTQ15274 297 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 SGCBQ16585 318 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 GPAT3Q53EU6 434 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 EEF1A1P5Q5VTE0 462 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 SLC2A7Q6PXP3 512 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 DNAJC14Q6Y2X3 702 aaPredicted RBP7.53□□□□□ -1.2
SSBP3-212ENST00000528930 ESPNLQ6ZVH7 1005 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 EIF3MQ7L2H7 374 aaKnown RBP7.53□□□□□ -1.2
SSBP3-212ENST00000528930 LUZP2Q86TE4 346 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.53□□□□□ -1.2
SSBP3-212ENST00000528930 TOR1AIP2Q8NFQ8 470 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 LINC01560Q8TB33 94 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 UBASH3BQ8TF42 649 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 STON2Q8WXE9 905 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 LZICQ8WZA0 190 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 AURKBQ96GD4 344 aaPredicted RBP7.53□□□□□ -1.2
SSBP3-212ENST00000528930 ITCHQ96J02 903 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 MRGPRX4Q96LA9 322 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 KLHL15Q96M94 604 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 RBM24Q9BX46 236 aaKnown RBP7.53□□□□□ -1.2
SSBP3-212ENST00000528930 REG4Q9BYZ8 158 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 FAM192AQ9GZU8 254 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 PIGMQ9H3S5 423 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 ESRP2Q9H6T0 727 aaKnown RBP7.53□□□□□ -1.2
SSBP3-212ENST00000528930 RMND5AQ9H871 391 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 COQ10BQ9H8M1 238 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 PAQR5Q9NXK6 330 aaPredicted RBP7.53□□□□□ -1.2
SSBP3-212ENST00000528930 GALNT8Q9NY28 637 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 SLAMF8Q9P0V8 285 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 PACSIN3Q9UKS6 424 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 PCDHB14Q9Y5E9 798 aa7.53□□□□□ -1.2
SSBP3-212ENST00000528930 AGAP5A6NIR3 686 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 EDF1O60869 148 aaKnown RBP7.52□□□□□ -1.21
SSBP3-212ENST00000528930 CYP7B1O75881 506 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 TFPTP0C1Z6 253 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 UBTFL6P0CB48 400 aaPredicted RBP7.52□□□□□ -1.21
SSBP3-212ENST00000528930 CD8BP10966 210 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 ETFAP13804 333 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 ME2P23368 584 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 SFTPDP35247 375 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 CRATP43155 626 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 MAGEA8P43361 318 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 PCYT1AP49585 367 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 ANXA11P50995 505 aaKnown RBP7.52□□□□□ -1.21
SSBP3-212ENST00000528930 ATP4BP51164 291 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 CCR4P51679 360 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 NR1H2P55055 460 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 SESN3P58005 492 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 STX1BP61266 288 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 SORDQ00796 357 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 ACKR1Q16570 336 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 TMEM176BQ3YBM2 270 aaPredicted RBP7.52□□□□□ -1.21
SSBP3-212ENST00000528930 PAGE3Q5JUK9 113 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 C6orf10Q5SRN2 563 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 LRIF1Q5T3J3 769 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 HBMQ6B0K9 141 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 ZNF474Q6S9Z5 364 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms