RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 CD14P08571 375 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 ASAH2BP0C7U1 165 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 ZNF883P0CG24 379 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 F8A1P23610 371 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 TACR3P29371 465 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 SLC25A1P53007 311 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 SUMO3P55854 103 aaPredicted RBP13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 ZNF117Q03924 483 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 HSF2Q03933 536 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 DOC2BQ14184 412 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 ZNF528Q3MIS6 628 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 GPR139Q6DWJ6 353 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 TMEM205Q6UW68 189 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 DCDC5Q6ZRR9 648 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 LANCL3Q6ZV70 420 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 SHFQ7M4L6 423 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 CPEB2Q7Z5Q1 589 aaKnown RBP13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 GATSQ8NAP1 163 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 AGBL5Q8NDL9 886 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 OR6S1Q8NH40 331 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 TMEM234Q8WY98 164 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 SMPDL3BQ92485 455 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 SLC25A46Q96AG3 418 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 WDFY2Q96P53 400 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 MROQ9BYG7 248 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 KCNN2Q9H2S1 579 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 SYNDIG1Q9H7V2 258 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 WDR54Q9H977 334 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 MMP25Q9NPA2 562 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 TRAV36DV7A0A075B6V5 113 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 SLC35F4A4IF30 521 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 MCIDASD6RGH6 385 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 WWP2O00308 870 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 GNB5O14775 395 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 OIP5O43482 229 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 CPNE3O75131 537 aaKnown RBP13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 SLC25A12O75746 678 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 ZFAND5O76080 213 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 CD1AP06126 327 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 GP1BAP07359 652 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 CD63P08962 238 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 OCM2P0CE71 109 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 OCMP0CE72 109 aaPredicted RBP13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 ATXN8OSP0DMR3 200 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 HIST1H1CP16403 213 aaKnown RBP13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 CFL1P23528 166 aaKnown RBP13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 ITPKBP27987 946 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 EVI2BP34910 448 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 DIO1P49895 249 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 POLR2HP52434 150 aaKnown RBP13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 MAP2K6P52564 334 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 SLC16A1P53985 500 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 ACTA2P62736 377 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 RPS25P62851 125 aaKnown RBP13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 ACTG2P63267 376 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 C17orf67Q0P5P2 114 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 TRIM61Q5EBN2 209 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 PHF19Q5T6S3 580 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 MARCH3Q86UD3 253 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 CCDC190Q86UF4 302 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 PRR22Q8IZ63 422 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 SYS1Q8N2H4 156 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 CENPSQ8N2Z9 138 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 C10orf53Q8N6V4 93 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 DTWD2Q8NBA8 298 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 SLC38A9Q8NBW4 561 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 APCDD1LQ8NCL9 501 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 OR10H4Q8NGA5 316 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 B4GALNT2Q8NHY0 566 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 HAVCR2Q8TDQ0 301 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 STK35Q8TDR2 534 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 DDOQ99489 341 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 HCAR1Q9BXC0 346 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 MED20Q9H944 212 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 ADGRL4Q9HBW9 690 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 PCDHGB2Q9Y5G2 931 aa13.47□□□□□ -0.25
ECHDC1-220ENST00000528402 PFDN1O60925 122 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 UPK1BO75841 260 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 CDRT1O95170 752 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 KLK3P07288 261 aaPredicted RBP13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 CELP19835 753 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 MSX1P28360 303 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 TMED10P49755 219 aaKnown RBP13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 ZFP36L1Q07352 338 aaKnown RBP13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 TRIM16LQ309B1 348 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 ALG10Q5BKT4 473 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 C22orf42Q6IC83 251 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 PAPD4Q6PIY7 484 aaKnown RBP13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 GRINAQ7Z429 371 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 JAZF1Q86VZ6 243 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 KLBQ86Z14 1044 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 LRRC75AQ8NAA5 344 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 NPEPL1Q8NDH3 523 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 OR4K13Q8NH42 304 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 CNN2Q99439 309 aaKnown RBP13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 SLC30A2Q9BRI3 323 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 CCDC32Q9BV29 185 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 NMNAT2Q9BZQ4 307 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 NRSN2Q9GZP1 204 aa13.46□□□□□ -0.26
ECHDC1-220ENST00000528402 SMURF1Q9HCE7 757 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms