RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 BCAS1O75363 584 aaPredicted RBP9.28□□□□□ -0.92
CPSF1-203ENST00000527916 PMS2P2O95744 297 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 KITP10721 976 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 RPS4Y1P22090 263 aaKnown RBP9.28□□□□□ -0.92
CPSF1-203ENST00000527916 CFPP27918 469 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 HTR3AP46098 478 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 OR3A2P47893 321 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 DIO1P49895 249 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 NME5P56597 212 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 IRX1P78414 480 aaPredicted RBP9.28□□□□□ -0.92
CPSF1-203ENST00000527916 ITGADQ13349 1161 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 GNA13Q14344 377 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 SYPL1Q16563 259 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 SLC9B1Q4ZJI4 515 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 SYT14P1Q58G82 188 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 AGBL2Q5U5Z8 902 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 Q6ZT83 130 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 IL17RELQ6ZVW7 336 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 SSX8Q7RTT4 187 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 ADGRG3Q86Y34 549 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 ANKFN1Q8N957 763 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 ZNF563Q8TA94 476 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 ZBTB9Q96C00 473 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 ZMYND19Q96E35 227 aaPredicted RBP9.28□□□□□ -0.92
CPSF1-203ENST00000527916 POTEKPQ9BYX7 375 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 CBLN4Q9NTU7 201 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 THUMPD1Q9NXG2 353 aaKnown RBP9.28□□□□□ -0.92
CPSF1-203ENST00000527916 CHRNA9Q9UGM1 479 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 TRAPPC4Q9Y296 219 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 UBDO15205 165 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 ZNF208O43345 1280 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 RAMP1O60894 148 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 TGDSO95455 350 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 ADAP00813 363 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 C1QCP02747 245 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 DBIP07108 87 aaKnown RBP9.27□□□□□ -0.93
CPSF1-203ENST00000527916 CHRM4P08173 479 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 NR2F1P10589 423 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 BMP4P12644 408 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 IL7RP16871 459 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 IDH2P48735 452 aaKnown RBP9.27□□□□□ -0.93
CPSF1-203ENST00000527916 MRPL19P49406 292 aaKnown RBP9.27□□□□□ -0.93
CPSF1-203ENST00000527916 MVDP53602 400 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 H3F3AP84243 136 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 PLAURQ03405 335 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 ZSWIM7Q19AV6 140 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 NXNQ6DKJ4 435 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 MAVSQ7Z434 540 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 ZNF440Q8IYI8 595 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 ZNF525Q8N782 197 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 SGMS2Q8NHU3 365 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 C10orf105Q8TEF2 133 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 CNOT9Q92600 299 aaKnown RBP9.27□□□□□ -0.93
CPSF1-203ENST00000527916 MUCL1Q96DR8 90 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 ZHX1-C8orf76Q96EF9 292 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 ITCHQ96J02 903 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 C7orf26Q96N11 449 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 ADAM19Q9H013 955 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 RMND5AQ9H871 391 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 CTPS2Q9NRF8 586 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 CALML5Q9NZT1 146 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 P2RX2Q9UBL9 471 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 DSPPQ9NZW4 1301 aa9.27□□□□□ -0.93
CPSF1-203ENST00000527916 IGHV3-15A0A0B4J1V0 119 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 CLDN24A6NM45 220 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 SHISA9B4DS77 424 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 C9JVG2 144 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 GPR171O14626 319 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 ABCD4O14678 606 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 KCNAB3O43448 404 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 GSNP06396 782 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 TFPTP0C1Z6 253 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 TFPIP10646 304 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 UQCRBP14927 111 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 PTNP21246 168 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 TTKP33981 857 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 RYKP34925 604 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 SLC1A3P43003 542 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 POLR2HP52434 150 aaKnown RBP9.26□□□□□ -0.93
CPSF1-203ENST00000527916 POLR2JP52435 117 aaKnown RBP9.26□□□□□ -0.93
CPSF1-203ENST00000527916 SLC16A1P53985 500 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 PPA1Q15181 289 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 TSC22D1Q15714 1073 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 MAPK11Q15759 364 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 COX20Q5RI15 118 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 ABLIM2Q6H8Q1 611 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 EPGNQ6UW88 154 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 GALNT5Q7Z7M9 940 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 ATG4DQ86TL0 474 aaPredicted RBP9.26□□□□□ -0.93
CPSF1-203ENST00000527916 P2RY8Q86VZ1 359 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 PEX5LQ8IYB4 626 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 FBXL14Q8N1E6 418 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 MIER2Q8N344 545 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 PIGXQ8TBF5 258 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 WDR60Q8WVS4 1066 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 ARL5BQ96KC2 179 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 OR52B2Q96RD2 323 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 ZNF300Q96RE9 604 aaPredicted RBP9.26□□□□□ -0.93
CPSF1-203ENST00000527916 TPT1P8Q9HAU6 139 aa9.26□□□□□ -0.93
CPSF1-203ENST00000527916 SLC6A13Q9NSD5 602 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms