RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 SKP1P63208 163 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 BTG2P78543 158 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 NHLH2Q02577 135 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 OCA2Q04671 838 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 EEF1A2Q05639 463 aaKnown RBP3.83□□□□□ -1.8
CD44-226ENST00000527889 CHRNB3Q05901 458 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 FUT5Q11128 374 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 PPP1R8Q12972 351 aaKnown RBP3.83□□□□□ -1.8
CD44-226ENST00000527889 FADDQ13158 208 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 FAM53BQ14153 422 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 HLXQ14774 488 aaPredicted RBP3.83□□□□□ -1.8
CD44-226ENST00000527889 GRM7Q14831 915 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 EXOSC7Q15024 291 aaKnown RBP3.83□□□□□ -1.8
CD44-226ENST00000527889 ELAVL1Q15717 326 aaKnown RBP3.83□□□□□ -1.8
CD44-226ENST00000527889 CEBPEQ15744 281 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 MAPK11Q15759 364 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 SYPL1Q16563 259 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 FAM98BQ52LJ0 330 aaKnown RBP3.83□□□□□ -1.8
CD44-226ENST00000527889 CYBRD1Q53TN4 286 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 SFT2D3Q587I9 215 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 C1QL3Q5VWW1 255 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 SHEQ5VZ18 495 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 SLC25A24Q6NUK1 477 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 C19orf48Q6RUI8 117 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 IZUMO2Q6UXV1 221 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 DGAT2L6Q6ZPD8 337 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 ARHGAP22Q7Z5H3 698 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 PHC2Q8IXK0 858 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 PRSS58Q8IYP2 241 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 IZUMO1Q8IYV9 350 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 ST13P4Q8IZP2 240 aaPredicted RBP3.83□□□□□ -1.8
CD44-226ENST00000527889 LRRC25Q8N386 305 aaPredicted RBP3.83□□□□□ -1.8
CD44-226ENST00000527889 ZNF565Q8N9K5 539 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 C11orf65Q8NCR3 313 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 OR7G2Q8NG99 324 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 OR4D9Q8NGE8 314 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 OR51Q1Q8NH59 317 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 PSMA8Q8TAA3 256 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 XAGE5Q8WWM1 108 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 TSLPQ969D9 159 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 RFKQ969G6 155 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 TAMM41Q96BW9 452 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 ZNF501Q96CX3 271 aaPredicted RBP3.83□□□□□ -1.8
CD44-226ENST00000527889 DUS3LQ96G46 650 aaKnown RBP3.83□□□□□ -1.8
CD44-226ENST00000527889 TMEM19Q96HH6 336 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 TPD52L3Q96J77 140 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 LOXL4Q96JB6 756 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 OR7D2Q96RA2 312 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 GFM1Q96RP9 751 aaKnown RBP3.83□□□□□ -1.8
CD44-226ENST00000527889 CIB1Q99828 191 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 EFHD1Q9BUP0 239 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 EDEM2Q9BV94 578 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 NPLQ9BXD5 320 aaPredicted RBP3.83□□□□□ -1.8
CD44-226ENST00000527889 CHRNA10Q9GZZ6 450 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 ZNF768Q9H5H4 540 aaKnown RBP3.83□□□□□ -1.8
CD44-226ENST00000527889 CLK4Q9HAZ1 481 aaKnown RBP3.83□□□□□ -1.8
CD44-226ENST00000527889 SCPEP1Q9HB40 452 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 APMAPQ9HDC9 416 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 PRTFDC1Q9NRG1 225 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 FGF21Q9NSA1 209 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 DCAF13Q9NV06 445 aaKnown RBP3.83□□□□□ -1.8
CD44-226ENST00000527889 BEX4Q9NWD9 120 aaPredicted RBP3.83□□□□□ -1.8
CD44-226ENST00000527889 OCIAD1Q9NX40 245 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 MS4A12Q9NXJ0 267 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 MAT2BQ9NZL9 334 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 SEMA5BQ9P283 1151 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 ANGPT4Q9Y264 503 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 CFL2Q9Y281 166 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 PCDHGA5Q9Y5G8 931 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 LYVE1Q9Y5Y7 322 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 KCNE3Q9Y6H6 103 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 ESPL1Q14674 2120 aa3.83□□□□□ -1.8
CD44-226ENST00000527889 SETD2Q9BYW2 2564 aaPredicted RBP3.82□□□□□ -1.8
CD44-226ENST00000527889 A0A1B0GX78 115 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 GAGE10A6NGK3 116 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 EFCAB7A8K855 629 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 A8MUA0 341 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 C5orf58C9J3I9 102 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 hCG_2039718K7EN88 272 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 UPK1AO00322 258 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 NTN3O00634 580 aaPredicted RBP3.82□□□□□ -1.8
CD44-226ENST00000527889 UBE2CO00762 179 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 SOCS2O14508 198 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 CDX4O14627 284 aaPredicted RBP3.82□□□□□ -1.8
CD44-226ENST00000527889 OR10H2O60403 315 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 CYTIPO60759 359 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 SCAF4O95104 1147 aaKnown RBP3.82□□□□□ -1.8
CD44-226ENST00000527889 GPANK1O95872 356 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 LDLRP01130 860 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 SEMG1P04279 462 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 CHRM4P08173 479 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 ELANEP08246 267 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 ANKRD34CP0C6C1 535 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 ZNF883P0CG24 379 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 TMEM225BP0DP42 221 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 ACP2P11117 423 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 CD59P13987 128 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 FASP25445 335 aa3.82□□□□□ -1.8
CD44-226ENST00000527889 PTBP1P26599 531 aaKnown RBP eCLIP3.82□□□□□ -1.8
CD44-226ENST00000527889 TTKP33981 857 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms