RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 MBD6Q96DN6 1003 aa9.31□□□□□ -0.92
RBBP4-216ENST00000525506 ALPK1Q96QP1 1244 aa9.31□□□□□ -0.92
RBBP4-216ENST00000525506 OR5B2Q96R09 309 aa9.31□□□□□ -0.92
RBBP4-216ENST00000525506 POTEKPQ9BYX7 375 aa9.31□□□□□ -0.92
RBBP4-216ENST00000525506 OR10A4Q9H209 315 aa9.31□□□□□ -0.92
RBBP4-216ENST00000525506 NANOGQ9H9S0 305 aa9.31□□□□□ -0.92
RBBP4-216ENST00000525506 CTPS2Q9NRF8 586 aa9.31□□□□□ -0.92
RBBP4-216ENST00000525506 EDARQ9UNE0 448 aa9.31□□□□□ -0.92
RBBP4-216ENST00000525506 TMED7Q9Y3B3 224 aa9.31□□□□□ -0.92
RBBP4-216ENST00000525506 VPS13CQ709C8 3753 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 IGKV3D-15A0A087WSY6 115 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 GMNCA6NCL1 334 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 SULT2B1O00204 365 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 NDUFAB1O14561 156 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 SMAD9O15198 467 aaKnown RBP9.3□□□□□ -0.92
RBBP4-216ENST00000525506 SNX3O60493 162 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 FMO6PO60774 539 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 FZD7O75084 574 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 MFN2O95140 757 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 CNOT4O95628 575 aaKnown RBP9.3□□□□□ -0.92
RBBP4-216ENST00000525506 CRYGSP22914 178 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 LOXP28300 417 aaPredicted RBP9.3□□□□□ -0.92
RBBP4-216ENST00000525506 GZMMP51124 257 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 SLC16A1P53985 500 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 RIPPLY3P57055 190 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 H3F3AP84243 136 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 TSC22D1Q15714 1073 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 VMACQ2NL98 169 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 TMEM201Q5SNT2 666 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 FAM91A1Q658Y4 838 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 STAC2Q6ZMT1 411 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 BEND4Q6ZU67 534 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 CCDC80Q76M96 950 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 NUFIP2Q7Z417 695 aaKnown RBP9.3□□□□□ -0.92
RBBP4-216ENST00000525506 MTDHQ86UE4 582 aaKnown RBP9.3□□□□□ -0.92
RBBP4-216ENST00000525506 CALHM3Q86XJ0 350 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 ARMC8Q8IUR7 673 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 WFDC11Q8NEX6 87 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 PIGXQ8TBF5 258 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 DNAJA4Q8WW22 397 aaPredicted RBP9.3□□□□□ -0.92
RBBP4-216ENST00000525506 DNAJA3Q96EY1 480 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 USB1Q9BQ65 265 aaKnown RBP9.3□□□□□ -0.92
RBBP4-216ENST00000525506 PSD2Q9BQI7 771 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 GSX1Q9H4S2 264 aaPredicted RBP9.3□□□□□ -0.92
RBBP4-216ENST00000525506 PIF1Q9H611 641 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 UBTD1Q9HAC8 227 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 ZNF226Q9NYT6 803 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 EMC3Q9P0I2 261 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 TMEM181Q9P2C4 612 aa9.3□□□□□ -0.92
RBBP4-216ENST00000525506 A8MVM7 634 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 TMEM229AB2RXF0 380 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 GPR171O14626 319 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 NPIPB7O75200 414 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 FESP07332 822 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 YES1P07947 543 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 GKN3PP0CG01 181 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 TFPIP10646 304 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 PNMTP11086 282 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 PPP3CBP16298 524 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 CXCR1P25024 350 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 PRDX6P30041 224 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 NCALDP61601 193 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 SLC35A1P78382 337 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 SELPLGQ14242 412 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 CAPRIN1Q14444 709 aaKnown RBP9.29□□□□□ -0.92
RBBP4-216ENST00000525506 ALKBH2Q6NS38 261 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 PAQR6Q6TCH4 344 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 HACD2Q6Y1H2 254 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 SSX8Q7RTT4 187 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 ATG4DQ86TL0 474 aaPredicted RBP9.29□□□□□ -0.92
RBBP4-216ENST00000525506 RANBP3LQ86VV4 465 aaPredicted RBP9.29□□□□□ -0.92
RBBP4-216ENST00000525506 CXorf67Q86X51 503 aaPredicted RBP9.29□□□□□ -0.92
RBBP4-216ENST00000525506 KRTAP1-3Q8IUG1 177 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 TUSC5Q8IXB3 177 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 OR10A6Q8NH74 314 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 STK35Q8TDR2 534 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 C3orf49Q96BT1 292 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 ZNF775Q96BV0 537 aaPredicted RBP9.29□□□□□ -0.92
RBBP4-216ENST00000525506 CMTM5Q96DZ9 223 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 ARL5BQ96KC2 179 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 HOPXQ9BPY8 73 aaPredicted RBP9.29□□□□□ -0.92
RBBP4-216ENST00000525506 ECSITQ9BQ95 431 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 TRIM2Q9C040 744 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 MYLK2Q9H1R3 596 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 ARMCX1Q9P291 453 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 ING1Q9UK53 422 aaPredicted RBP9.29□□□□□ -0.92
RBBP4-216ENST00000525506 SLC13A4Q9UKG4 626 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 CADP27708 2225 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 USF3Q68DE3 2245 aa9.29□□□□□ -0.92
RBBP4-216ENST00000525506 ZFHX3Q15911 3703 aa9.28□□□□□ -0.92
RBBP4-216ENST00000525506 LOC100653049A0A140TA62 436 aa9.28□□□□□ -0.92
RBBP4-216ENST00000525506 TMEM72A0PK05 275 aa9.28□□□□□ -0.92
RBBP4-216ENST00000525506 FAM220BPB1ANY3 271 aa9.28□□□□□ -0.92
RBBP4-216ENST00000525506 KLF4O43474 513 aa9.28□□□□□ -0.92
RBBP4-216ENST00000525506 KRT34O76011 436 aa9.28□□□□□ -0.92
RBBP4-216ENST00000525506 LGI1O95970 557 aa9.28□□□□□ -0.92
RBBP4-216ENST00000525506 PLAUP00749 431 aa9.28□□□□□ -0.92
RBBP4-216ENST00000525506 IFNA14P01570 189 aa9.28□□□□□ -0.92
RBBP4-216ENST00000525506 GPIP06744 558 aa9.28□□□□□ -0.92
RBBP4-216ENST00000525506 COX4I1P13073 169 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms