RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 GAS1P54826 345 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 EMP2P54851 167 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 WNT4P56705 351 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 RPS4XP62701 263 aaKnown RBP6.87□□□□□ -1.31
CTR9-202ENST00000524523 RNF4P78317 190 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 HOXC5Q00444 222 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 PIGFQ07326 219 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 LGALS3BPQ08380 585 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 MFSD13AQ14CX5 517 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 VWA2Q5GFL6 755 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 SLC35D3Q5M8T2 416 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 PWWP2BQ6NUJ5 590 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 ARHGAP11AQ6P4F7 1023 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 WDR88Q6ZMY6 472 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 CCDC81Q6ZN84 652 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 MEPCEQ7L2J0 689 aaKnown RBP6.87□□□□□ -1.31
CTR9-202ENST00000524523 TMPRSS9Q7Z410 1059 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 ANKRD37Q7Z713 158 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 ATG4DQ86TL0 474 aaPredicted RBP6.87□□□□□ -1.31
CTR9-202ENST00000524523 ADCK1Q86TW2 530 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 NLGN4XQ8N0W4 816 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 OR52I1Q8NGK6 324 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 OR8D4Q8NGM9 314 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 OR5W2Q8NH69 310 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 FANK1Q8TC84 345 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 DYNC2LI1Q8TCX1 351 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 BORCS5Q969J3 196 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 C3orf49Q96BT1 292 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 TMCO6Q96DC7 493 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 CLIP3Q96DZ5 547 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 ZHX1-C8orf76Q96EF9 292 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 MRPL48Q96GC5 212 aaKnown RBP6.87□□□□□ -1.31
CTR9-202ENST00000524523 DEPDC7Q96QD5 511 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 SNX18Q96RF0 628 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 SECISBP2Q96T21 854 aaKnown RBP6.87□□□□□ -1.31
CTR9-202ENST00000524523 LPAR4Q99677 370 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 PLA2G12AQ9BZM1 189 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 EGLN3Q9H6Z9 239 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 AMBNQ9NP70 447 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 SDHAF3Q9NRP4 125 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 MBNL3Q9NUK0 354 aaKnown RBP6.87□□□□□ -1.31
CTR9-202ENST00000524523 CNIH4Q9P003 139 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 CCDC59Q9P031 241 aaKnown RBP6.87□□□□□ -1.31
CTR9-202ENST00000524523 AASSQ9UDR5 926 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 OSGIN1Q9UJX0 560 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 CAB39Q9Y376 341 aaPredicted RBP6.87□□□□□ -1.31
CTR9-202ENST00000524523 RNF114Q9Y508 228 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 PCDHGA3Q9Y5H0 932 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 SCN3AQ9NY46 2000 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 CEP192Q8TEP8 1941 aa6.87□□□□□ -1.31
CTR9-202ENST00000524523 CABIN1Q9Y6J0 2220 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 TDRD6O60522 2096 aaKnown RBP6.86□□□□□ -1.31
CTR9-202ENST00000524523 EML5Q05BV3 1969 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 THADAQ6YHU6 1953 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 IGLV3-32A0A0A0MS00 114 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 PRR23D1E9PI22 279 aaPredicted RBP6.86□□□□□ -1.31
CTR9-202ENST00000524523 ETV2O00321 342 aaPredicted RBP6.86□□□□□ -1.31
CTR9-202ENST00000524523 MYL12BO14950 172 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 OR2T1O43869 369 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 REM1O75628 298 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 ZFAND5O76080 213 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 OR7A10O76100 309 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 LDOC1O95751 146 aaPredicted RBP6.86□□□□□ -1.31
CTR9-202ENST00000524523 TXNDC12O95881 172 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 PTHP01270 115 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 CD1AP06126 327 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 IGFBP1P08833 259 aaPredicted RBP6.86□□□□□ -1.31
CTR9-202ENST00000524523 PRR23D2P0DMB1 279 aaPredicted RBP6.86□□□□□ -1.31
CTR9-202ENST00000524523 SAGP10523 405 aaPredicted RBP6.86□□□□□ -1.31
CTR9-202ENST00000524523 ICAM2P13598 275 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 ZNF182P17025 639 aaPredicted RBP6.86□□□□□ -1.31
CTR9-202ENST00000524523 FUT1P19526 365 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 CALRP27797 417 aaKnown RBP6.86□□□□□ -1.31
CTR9-202ENST00000524523 FGF9P31371 208 aaPredicted RBP6.86□□□□□ -1.31
CTR9-202ENST00000524523 GPR4P46093 362 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 P2RX1P51575 399 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 NUDT6P53370 316 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 CDH11P55287 796 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 TAS2R43P59537 309 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 ACTC1P68032 377 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 ACTA1P68133 377 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 C17orf67Q0P5P2 114 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 PLCXD2Q0VAA5 305 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 SRSF5Q13243 272 aaKnown RBP6.86□□□□□ -1.31
CTR9-202ENST00000524523 SNTA1Q13424 505 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 FHL1Q13642 323 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 CBFBQ13951 182 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 TRAM1Q15629 374 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 EXT1Q16394 746 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 ZNF362Q5T0B9 420 aaPredicted RBP6.86□□□□□ -1.31
CTR9-202ENST00000524523 GPR139Q6DWJ6 353 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 SLC30A6Q6NXT4 461 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 CD200R1LQ6Q8B3 271 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 KIRREL2Q6UWL6 708 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 TMPRSS11AQ6ZMR5 421 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 CXXC5Q7LFL8 322 aaKnown RBP6.86□□□□□ -1.31
CTR9-202ENST00000524523 CPEB2Q7Z5Q1 589 aaKnown RBP6.86□□□□□ -1.31
CTR9-202ENST00000524523 HMGN2P46Q86SG4 172 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 SLCO6A1Q86UG4 719 aa6.86□□□□□ -1.31
CTR9-202ENST00000524523 C9orf40Q8IXQ3 194 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms