RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 TMED7Q9Y3B3 224 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 DYSFO75923 2080 aa19.79■□□□□ 0.76
PVT1-218ENST00000523328 LRP5LA4QPB2 252 aa19.78■□□□□ 0.76
PVT1-218ENST00000523328 B9A039 149 aa19.78■□□□□ 0.76
PVT1-218ENST00000523328 ZNF208O43345 1280 aa19.78■□□□□ 0.76
PVT1-218ENST00000523328 CDH2P19022 906 aaPredicted RBP19.78■□□□□ 0.76
PVT1-218ENST00000523328 RUNX1T1Q06455 604 aa19.78■□□□□ 0.76
PVT1-218ENST00000523328 ADIPOQQ15848 244 aa19.78■□□□□ 0.76
PVT1-218ENST00000523328 ZSWIM7Q19AV6 140 aa19.78■□□□□ 0.76
PVT1-218ENST00000523328 PAQR6Q6TCH4 344 aa19.78■□□□□ 0.76
PVT1-218ENST00000523328 MEX3DQ86XN8 651 aaKnown RBP19.78■□□□□ 0.76
PVT1-218ENST00000523328 GSPT2Q8IYD1 628 aaKnown RBP19.78■□□□□ 0.76
PVT1-218ENST00000523328 EPS8L3Q8TE67 593 aaKnown RBP19.78■□□□□ 0.76
PVT1-218ENST00000523328 ROPN1LQ96C74 230 aa19.78■□□□□ 0.76
PVT1-218ENST00000523328 DDIT4LQ96D03 193 aa19.78■□□□□ 0.76
PVT1-218ENST00000523328 ZNF385AQ96PM9 386 aaKnown RBP19.78■□□□□ 0.76
PVT1-218ENST00000523328 SLC38A2Q96QD8 506 aa19.78■□□□□ 0.76
PVT1-218ENST00000523328 PLK3Q9H4B4 646 aa19.78■□□□□ 0.76
PVT1-218ENST00000523328 OBP2BQ9NPH6 170 aa19.78■□□□□ 0.76
PVT1-218ENST00000523328 ZC3H12DA2A288 527 aaKnown RBP19.77■□□□□ 0.76
PVT1-218ENST00000523328 RNASET2O00584 256 aaKnown RBP19.77■□□□□ 0.76
PVT1-218ENST00000523328 AP3D1O14617 1153 aa19.77■□□□□ 0.76
PVT1-218ENST00000523328 SKAP2O75563 359 aaPredicted RBP19.77■□□□□ 0.76
PVT1-218ENST00000523328 PDE5AO76074 875 aa19.77■□□□□ 0.76
PVT1-218ENST00000523328 AGR2O95994 175 aa19.77■□□□□ 0.76
PVT1-218ENST00000523328 ITGA2P17301 1181 aa19.77■□□□□ 0.76
PVT1-218ENST00000523328 HTR3AP46098 478 aa19.77■□□□□ 0.76
PVT1-218ENST00000523328 CLDN8P56748 225 aa19.77■□□□□ 0.76
PVT1-218ENST00000523328 EFNB3Q15768 340 aa19.77■□□□□ 0.76
PVT1-218ENST00000523328 ATAD3BQ5T9A4 648 aa19.77■□□□□ 0.76
PVT1-218ENST00000523328 TNFAIP8L2Q6P589 184 aaPredicted RBP19.77■□□□□ 0.76
PVT1-218ENST00000523328 ZCCHC23Q6ZST2 131 aa19.77■□□□□ 0.76
PVT1-218ENST00000523328 SPATA19Q7Z5L4 167 aa19.77■□□□□ 0.76
PVT1-218ENST00000523328 POMGNT2Q8NAT1 580 aa19.77■□□□□ 0.76
PVT1-218ENST00000523328 CNOT9Q92600 299 aaKnown RBP19.77■□□□□ 0.76
PVT1-218ENST00000523328 PMM1Q92871 262 aa19.77■□□□□ 0.76
PVT1-218ENST00000523328 KATNB1Q9BVA0 655 aa19.77■□□□□ 0.76
PVT1-218ENST00000523328 PPCSQ9HAB8 311 aa19.77■□□□□ 0.76
PVT1-218ENST00000523328 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.77■□□□□ 0.76
PVT1-218ENST00000523328 ZDHHC2Q9UIJ5 367 aa19.77■□□□□ 0.76
PVT1-218ENST00000523328 TENM1Q9UKZ4 2725 aa19.77■□□□□ 0.76
PVT1-218ENST00000523328 PRAMEF27A3QJZ7 478 aa19.76■□□□□ 0.75
PVT1-218ENST00000523328 STAMBPO95630 424 aa19.76■□□□□ 0.75
PVT1-218ENST00000523328 OR4A8P0C604 315 aa19.76■□□□□ 0.75
PVT1-218ENST00000523328 GIFP27352 417 aa19.76■□□□□ 0.75
PVT1-218ENST00000523328 IL2RGP31785 369 aa19.76■□□□□ 0.75
PVT1-218ENST00000523328 PPOXP50336 477 aa19.76■□□□□ 0.75
PVT1-218ENST00000523328 POLR2HP52434 150 aaKnown RBP19.76■□□□□ 0.75
PVT1-218ENST00000523328 TBRG1Q3YBR2 411 aa19.76■□□□□ 0.75
PVT1-218ENST00000523328 AAED1Q7RTV5 226 aa19.76■□□□□ 0.75
PVT1-218ENST00000523328 OR4A15Q8NGL6 344 aa19.76■□□□□ 0.75
PVT1-218ENST00000523328 TUBGCP3Q96CW5 907 aa19.76■□□□□ 0.75
PVT1-218ENST00000523328 MKS1Q9NXB0 559 aa19.76■□□□□ 0.75
PVT1-218ENST00000523328 WIPF1O43516 503 aa19.75■□□□□ 0.75
PVT1-218ENST00000523328 SCN2BO60939 215 aa19.75■□□□□ 0.75
PVT1-218ENST00000523328 LILRA1O75019 489 aa19.75■□□□□ 0.75
PVT1-218ENST00000523328 CRYAAP02489 173 aa19.75■□□□□ 0.75
PVT1-218ENST00000523328 TACSTD2P09758 323 aa19.75■□□□□ 0.75
PVT1-218ENST00000523328 TACR3P29371 465 aa19.75■□□□□ 0.75
PVT1-218ENST00000523328 IDH3GP51553 393 aaPredicted RBP19.75■□□□□ 0.75
PVT1-218ENST00000523328 OTUD3Q5T2D3 398 aaPredicted RBP19.75■□□□□ 0.75
PVT1-218ENST00000523328 TMEM99Q8N816 258 aa19.75■□□□□ 0.75
PVT1-218ENST00000523328 OR9K2Q8NGE7 335 aa19.75■□□□□ 0.75
PVT1-218ENST00000523328 OR8J2Q8NGG1 315 aa19.75■□□□□ 0.75
PVT1-218ENST00000523328 OR1K1Q8NGR3 316 aa19.75■□□□□ 0.75
PVT1-218ENST00000523328 AURKBQ96GD4 344 aaPredicted RBP19.75■□□□□ 0.75
PVT1-218ENST00000523328 APOPT1Q96IL0 206 aa19.75■□□□□ 0.75
PVT1-218ENST00000523328 KCNS3Q9BQ31 491 aa19.75■□□□□ 0.75
PVT1-218ENST00000523328 SF3B5Q9BWJ5 86 aaKnown RBP19.75■□□□□ 0.75
PVT1-218ENST00000523328 CRNNQ9UBG3 495 aaPredicted RBP19.75■□□□□ 0.75
PVT1-218ENST00000523328 TMEFF2Q9UIK5 374 aaPredicted RBP19.75■□□□□ 0.75
PVT1-218ENST00000523328 UQCRC2P22695 453 aa19.74■□□□□ 0.75
PVT1-218ENST00000523328 MAP2K6P52564 334 aa19.74■□□□□ 0.75
PVT1-218ENST00000523328 NAAAQ02083 359 aa19.74■□□□□ 0.75
PVT1-218ENST00000523328 EMX2Q04743 252 aa19.74■□□□□ 0.75
PVT1-218ENST00000523328 SAXO2Q658L1 398 aa19.74■□□□□ 0.75
PVT1-218ENST00000523328 ANKRD16Q6P6B7 361 aa19.74■□□□□ 0.75
PVT1-218ENST00000523328 VHLLQ6RSH7 139 aa19.74■□□□□ 0.75
PVT1-218ENST00000523328 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.74■□□□□ 0.75
PVT1-218ENST00000523328 PLA2G12AQ9BZM1 189 aa19.74■□□□□ 0.75
PVT1-218ENST00000523328 RAB1BQ9H0U4 201 aa19.74■□□□□ 0.75
PVT1-218ENST00000523328 TMEM45AQ9NWC5 275 aa19.74■□□□□ 0.75
PVT1-218ENST00000523328 ASIC5Q9NY37 505 aa19.74■□□□□ 0.75
PVT1-218ENST00000523328 SLC17A7Q9P2U7 560 aa19.74■□□□□ 0.75
PVT1-218ENST00000523328 AKR7A3O95154 331 aa19.73■□□□□ 0.75
PVT1-218ENST00000523328 CECR9P0C854 216 aa19.73■□□□□ 0.75
PVT1-218ENST00000523328 CFPP27918 469 aa19.73■□□□□ 0.75
PVT1-218ENST00000523328 CALCRP30988 508 aa19.73■□□□□ 0.75
PVT1-218ENST00000523328 SLC1A3P43003 542 aa19.73■□□□□ 0.75
PVT1-218ENST00000523328 CHN2P52757 468 aa19.73■□□□□ 0.75
PVT1-218ENST00000523328 LGALS3BPQ08380 585 aa19.73■□□□□ 0.75
PVT1-218ENST00000523328 MAD2L1Q13257 205 aaPredicted RBP19.73■□□□□ 0.75
PVT1-218ENST00000523328 ABHD12BQ7Z5M8 362 aaPredicted RBP19.73■□□□□ 0.75
PVT1-218ENST00000523328 ANKRD46Q86W74 232 aa19.73■□□□□ 0.75
PVT1-218ENST00000523328 UBLCP1Q8WVY7 318 aaPredicted RBP19.73■□□□□ 0.75
PVT1-218ENST00000523328 BCL2L2Q92843 193 aaPredicted RBP19.73■□□□□ 0.75
PVT1-218ENST00000523328 HPS1Q92902 700 aa19.73■□□□□ 0.75
PVT1-218ENST00000523328 RHOXF2Q9BQY4 288 aa19.73■□□□□ 0.75
PVT1-218ENST00000523328 PIF1Q9H611 641 aa19.73■□□□□ 0.75
PVT1-218ENST00000523328 SEC61A2Q9H9S3 476 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms