RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 HSP90B2PQ58FF3 399 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 RUNDC3AQ59EK9 446 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 GTF2IRD2BQ6EKJ0 949 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 ABLIM2Q6H8Q1 611 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 GTF2IRD2Q86UP8 949 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 DPP10Q8N608 796 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 MED18Q9BUE0 208 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 SPATA9Q9BWV2 254 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 ADAM19Q9H013 955 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 BCO1Q9HAY6 547 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 NDRG3Q9UGV2 375 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 SPIN1Q9Y657 262 aaPredicted RBP13.37□□□□□ -0.27
PCM1-218ENST00000523055 DEFB108AA8MXU0 73 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 TPST1O60507 370 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 PMS2P2O95744 297 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 THBDP07204 575 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 YES1P07947 543 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 PPIBP23284 216 aaKnown RBP13.36□□□□□ -0.27
PCM1-218ENST00000523055 ARFIP2P53365 341 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 CSNK2A1P68400 391 aaPredicted RBP13.36□□□□□ -0.27
PCM1-218ENST00000523055 NFYCQ13952 458 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 SCARB2Q14108 478 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 PRAMEF8Q5VWM4 474 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 PRAMEF7Q5VXH5 474 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 HMBOX1Q6NT76 420 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 REEP3Q6NUK4 255 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 PTOV1Q86YD1 416 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 CCDC103Q8IW40 242 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 ZNF440Q8IYI8 595 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 SLC43A2Q8N370 569 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 IGFBPL1Q8WX77 278 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 ANKRD27Q96NW4 1050 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 CGREF1Q99674 301 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 CCDC134Q9H6E4 229 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 MED4Q9NPJ6 270 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 KLHL9Q9P2J3 617 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 PRSS50Q9UI38 385 aa13.36□□□□□ -0.27
PCM1-218ENST00000523055 ZNF716A6NP11 495 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 EVPLLA8MZ36 301 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 GCM2O75603 506 aaPredicted RBP13.35□□□□□ -0.27
PCM1-218ENST00000523055 ETS2P15036 469 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 HTR3AP46098 478 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 PCYT1AP49585 367 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 OR2B6P58173 313 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 ACKR1Q16570 336 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 METTL21CQ5VZV1 264 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 GABRG1Q8N1C3 465 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 C3orf49Q96BT1 292 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 HS3ST6Q96QI5 342 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 WFDC6Q9BQY6 131 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 PRR14Q9BWN1 585 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 GSX2Q9BZM3 304 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 TMEM38AQ9H6F2 299 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 SAR1AQ9NR31 198 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 TMEM181Q9P2C4 612 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 ZNF232Q9UNY5 417 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 IFT52Q9Y366 437 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 HDGFL3Q9Y3E1 203 aa13.35□□□□□ -0.27
PCM1-218ENST00000523055 ZNF208O43345 1280 aa13.34□□□□□ -0.27
PCM1-218ENST00000523055 UQCRBP14927 111 aa13.34□□□□□ -0.27
PCM1-218ENST00000523055 FPR1P21462 350 aa13.34□□□□□ -0.27
PCM1-218ENST00000523055 NTF4P34130 210 aa13.34□□□□□ -0.27
PCM1-218ENST00000523055 MDH1P40925 334 aaKnown RBP13.34□□□□□ -0.27
PCM1-218ENST00000523055 KLF10Q13118 480 aa13.34□□□□□ -0.27
PCM1-218ENST00000523055 WBP2NLQ6ICG8 309 aa13.34□□□□□ -0.27
PCM1-218ENST00000523055 BEND4Q6ZU67 534 aa13.34□□□□□ -0.27
PCM1-218ENST00000523055 MTDHQ86UE4 582 aaKnown RBP13.34□□□□□ -0.27
PCM1-218ENST00000523055 STK32CQ86UX6 486 aa13.34□□□□□ -0.27
PCM1-218ENST00000523055 DDIT4LQ96D03 193 aa13.34□□□□□ -0.27
PCM1-218ENST00000523055 CCL19Q99731 98 aa13.34□□□□□ -0.27
PCM1-218ENST00000523055 CACYBPQ9HB71 228 aaKnown RBP13.34□□□□□ -0.27
PCM1-218ENST00000523055 GP6Q9HCN6 339 aa13.34□□□□□ -0.27
PCM1-218ENST00000523055 CORO2BQ9UQ03 480 aa13.34□□□□□ -0.27
PCM1-218ENST00000523055 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.34□□□□□ -0.278e-7■■■■■ 35.2
PCM1-218ENST00000523055 FXYD1O00168 92 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 CASKO14936 926 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 F12P00748 615 aaPredicted RBP13.33□□□□□ -0.28
PCM1-218ENST00000523055 IGHV3-9P01782 118 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 OPN1SWP03999 348 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 CRYGSP22914 178 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 SLC6A2P23975 617 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 CXCR1P25024 350 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 HTR2AP28223 471 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 PRKAR1BP31321 381 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 OR3A2P47893 321 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 PTH2RP49190 550 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 COPZ1P61923 177 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 DMTNQ08495 405 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 CYP51A1Q16850 503 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 TSPEARQ8WU66 669 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 C10orf82Q8WW14 230 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 PIK3IP1Q96FE7 263 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 ZNF317Q96PQ6 595 aaPredicted RBP13.33□□□□□ -0.28
PCM1-218ENST00000523055 ACTR6Q9GZN1 396 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 PIF1Q9H611 641 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 ARMCX1Q9P291 453 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 ALPK2Q86TB3 2170 aa13.33□□□□□ -0.28
PCM1-218ENST00000523055 HEATR1Q9H583 2144 aaKnown RBP13.32□□□□□ -0.28
PCM1-218ENST00000523055 IGKV3D-15A0A087WSY6 115 aa13.32□□□□□ -0.28
PCM1-218ENST00000523055 TMEM229AB2RXF0 380 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms