RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 GPR61Q9BZJ8 451 aa3.37□□□□□ -1.87
HMGB1P1-201ENST00000522557 PRR34Q9NV39 138 aa3.37□□□□□ -1.87
HMGB1P1-201ENST00000522557 SEC14L3Q9UDX4 400 aa3.37□□□□□ -1.87
HMGB1P1-201ENST00000522557 SUN2Q9UH99 717 aa3.37□□□□□ -1.87
HMGB1P1-201ENST00000522557 A0A1B0GVL5 298 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 PCP4L1A6NKN8 68 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 HAS3O00219 553 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 LGI1O95970 557 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 HSMCR30P0CW71 290 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 RNH1P13489 461 aaKnown RBP3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 VDAC1P21796 283 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 VHLP40337 213 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 EPS15P42566 896 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 CRYBB2P43320 205 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 OGDHQ02218 1023 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 CHRNB3Q05901 458 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 GSG1Q2KHT4 349 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 SLC25A30Q5SVS4 291 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 PRAMEF5Q5TYX0 476 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 PRAMEF6Q5VXH4 476 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 WDR74Q6RFH5 385 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 FBXL16Q8N461 479 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 SLC2A14Q8TDB8 520 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 FGGYQ96C11 551 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 RASD2Q96D21 266 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 SLC25A38Q96DW6 304 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 TM4SF19Q96DZ7 209 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 FAM122AQ96E09 287 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 DCDC2Q9UHG0 476 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 PEX16Q9Y5Y5 336 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 NPTNQ9Y639 398 aa3.36□□□□□ -1.87
HMGB1P1-201ENST00000522557 GRIN2BQ13224 1484 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 IGHV1OR21-1A0A087WYE8 117 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 KLF18A0A0U1RQI7 1052 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 SMIM28A0A1B0GU29 152 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 GOLGA8OA6NCC3 632 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 GOLGA8NF8WBI6 632 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 KIF2AO00139 706 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 MED7O43513 233 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 ATP5LO75964 103 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 STAMBPO95630 424 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 TIMP1P01033 207 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 CST1P01037 141 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 BTDP43251 543 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 PLK1P53350 603 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 BIDP55957 195 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 ATP5IP56385 69 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 BST2Q10589 180 aaKnown RBP3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 ASPHQ12797 758 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 NSUN5P1Q3KNT7 163 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 C11orf71Q6IPW1 123 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 CCDC50Q8IVM0 306 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 RDH10Q8IZV5 341 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 C6orf223Q8N319 242 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 OR52H1Q8NGJ2 320 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 SETD7Q8WTS6 366 aaKnown RBP3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 TIMD4Q96H15 378 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 CNOT6LQ96LI5 555 aaKnown RBP3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 PLEKHF1Q96S99 279 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 C20orf85Q9H1P6 137 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 NARFLQ9H6Q4 476 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 SNAPC4Q5SXM2 1469 aa3.35□□□□□ -1.87
HMGB1P1-201ENST00000522557 SYNJ1O43426 1573 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 BTBD17A6NE02 478 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 TUBAL3A6NHL2 446 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 EPOPA6NHQ4 379 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 KRTAP4-16G5E9R7 235 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 PHOX2AO14813 284 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 RGS16O15492 202 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 C1orf105O95561 183 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 ZNF43P17038 809 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 NCF2P19878 526 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 GNA11P29992 359 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 HTR1FP30939 366 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 YAP1P46937 504 aaKnown RBP3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 PLP1P60201 277 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 CUL2Q13617 745 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 KIAA0040Q15053 153 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 KCTD21Q4G0X4 260 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 PAGE2BQ5JRK9 111 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 C9orf129Q5T035 196 aaKnown RBP3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 Q6ZSR3 168 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 ACOT7LQ6ZUV0 252 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 PSTKQ8IV42 348 aaKnown RBP3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 ATP6V0D2Q8N8Y2 350 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 NKAPP1Q8N9T2 125 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 SDR9C7Q8NEX9 313 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 C7orf33Q8WU49 177 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 DNAJA4Q8WW22 397 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 UFD1Q92890 307 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 PKIBQ9C010 78 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 SLITRK2Q9H156 845 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 NEUROG2Q9H2A3 272 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 REEP4Q9H6H4 257 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 SUDS3Q9H7L9 328 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 NHEJ1Q9H9Q4 299 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 NMRAL1Q9HBL8 299 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 NT5MQ9NPB1 228 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 POLE4Q9NR33 117 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms