RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 IL11P20809 199 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 ACVR2AP27037 513 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 DNAJA1P31689 397 aaKnown RBP5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 CEACAM8P31997 349 aaPredicted RBP5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 IFNGR2P38484 337 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 PCYT1AP49585 367 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 STARP49675 285 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 DIO1P49895 249 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 RNF144AP50876 292 aaPredicted RBP5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 ARHGDIAP52565 204 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 SUCLG1P53597 346 aaKnown RBP5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 SLC16A1P53985 500 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 CLDN15P56746 228 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 CLDN20P56880 219 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 CARD18P57730 90 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 MYBPHQ13203 477 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 CCNIQ14094 377 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 RNPS1Q15287 305 aaKnown RBP5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 POU4F3Q15319 338 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 ACSF3Q4G176 576 aaPredicted RBP5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 EMC4Q5J8M3 183 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 DCST1Q5T197 706 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 C1orf185Q5T7R7 199 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 HBMQ6B0K9 141 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 WDR88Q6ZMY6 472 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 TMPRSS11FQ6ZWK6 438 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 MBOAT2Q6ZWT7 520 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 RRM2BQ7LG56 351 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 MAMDC2Q7Z304 686 aaPredicted RBP5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 TSPYL5Q86VY4 417 aaPredicted RBP5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 DOLPP1Q86YN1 238 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 CDK20Q8IZL9 346 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 OR4C15Q8NGM1 316 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 OR10Q1Q8NGQ4 319 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 PIGXQ8TBF5 258 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 SLC7A13Q8TCU3 470 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 OSTF1Q92882 214 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 SLCO4A1Q96BD0 722 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 ARL5BQ96KC2 179 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 DMRTA2Q96SC8 542 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 NAA11Q9BSU3 229 aaPredicted RBP5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 BDH2Q9BUT1 245 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 PTDSS2Q9BVG9 487 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 DENND2DQ9H6A0 471 aaPredicted RBP5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 REEP1Q9H902 201 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 FKRPQ9H9S5 495 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 PNPLA3Q9NST1 481 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 ALKBH4Q9NXW9 302 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 MRPL39Q9NYK5 338 aaKnown RBP5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 ZNF229Q9UJW7 825 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 TMCC3Q9ULS5 477 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 AURKCQ9UQB9 309 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 CAMK2AQ9UQM7 478 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 LYVE1Q9Y5Y7 322 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 HIVEP3Q5T1R4 2406 aa5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 INTS1Q8N201 2190 aaKnown RBP5.71□□□□□ -1.5
IGHV4-55-201ENST00000520889 PRRC2CQ9Y520 2896 aaKnown RBP5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 NBASA2RRP1 2371 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 IGKV3D-15A0A087WSY6 115 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 A0A087WUU8 490 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 A0A1W2PNV4 684 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 SH3PXD2BA1X283 911 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 ZC3H12DA2A288 527 aaKnown RBP5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 NPIPB13A6NJU9 1138 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 SLC22A20A6NK97 555 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 CLCA1A8K7I4 914 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 HSPB2A8KAH6 182 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 ZNF724A8MTY0 619 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 SHISA8B8ZZ34 492 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 NPIPB4C9JG80 1138 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 J3KTA2 159 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 hCG_2039718K7EN88 272 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 TNFRSF11BO00300 401 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 GPR171O14626 319 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 TNFSF11O14788 317 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 CLOCKO15516 846 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 CYTIPO60759 359 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 WISP2O76076 250 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 RCBTB2O95199 551 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 WISP1O95388 367 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 SYNGR4O95473 234 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 IL18BPO95998 194 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 CST1P01037 141 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 LDLRP01130 860 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 IL2RAP01589 272 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 BGLAPP02818 100 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 ASAH2BP0C7U1 165 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 TFPIP10646 304 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 IMPDH2P12268 514 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 AGAP20933 346 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 FPR1P21462 350 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 ENPP1P22413 925 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 FASP25445 335 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 RRM2P31350 389 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 EIF1AXP47813 144 aaKnown RBP5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 NUP107P57740 925 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 HSF1Q00613 529 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 SPIBQ01892 262 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 ZP4Q12836 540 aa5.7□□□□□ -1.5
IGHV4-55-201ENST00000520889 KPNB1Q14974 876 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms