RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 WDR55Q9H6Y2 383 aaPredicted RBP17.26■□□□□ 0.35
PABPC1-215ENST00000520804 POU2F3Q9UKI9 436 aa17.26■□□□□ 0.35
PABPC1-215ENST00000520804 CHD3Q12873 2000 aaKnown RBP17.25■□□□□ 0.35
PABPC1-215ENST00000520804 HDAC3O15379 428 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 SSX4O60224 188 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 KRT75O95678 551 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 EPHA3P29320 983 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 IRX1P78414 480 aaPredicted RBP17.25■□□□□ 0.35
PABPC1-215ENST00000520804 MAPK11Q15759 364 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 GSTA3Q16772 222 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 PAQR6Q6TCH4 344 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 B3GLCTQ6Y288 498 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 CROCCP2Q86T23 111 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 PEX5LQ8IYB4 626 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 ANKRD42Q8N9B4 389 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 WDR31Q8NA23 367 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 C1orf162Q8NEQ5 155 aaPredicted RBP17.25■□□□□ 0.35
PABPC1-215ENST00000520804 ADAD1Q96M93 576 aaKnown RBP17.25■□□□□ 0.35
PABPC1-215ENST00000520804 CACNG6Q9BXT2 260 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 SLC7A10Q9NS82 523 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 CBLN4Q9NTU7 201 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 THAP1Q9NVV9 213 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 RLIMQ9NVW2 624 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 UPB1Q9UBR1 384 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 DCTN4Q9UJW0 460 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 RAB21Q9UL25 225 aa17.25■□□□□ 0.35
PABPC1-215ENST00000520804 TRPC5OSA6NMA1 111 aa17.24■□□□□ 0.35
PABPC1-215ENST00000520804 M0R1B8 84 aa17.24■□□□□ 0.35
PABPC1-215ENST00000520804 RFXANKO14593 260 aa17.24■□□□□ 0.35
PABPC1-215ENST00000520804 TLX2O43763 284 aaPredicted RBP17.24■□□□□ 0.35
PABPC1-215ENST00000520804 CD5LO43866 347 aa17.24■□□□□ 0.35
PABPC1-215ENST00000520804 SNNO75324 88 aaPredicted RBP17.24■□□□□ 0.35
PABPC1-215ENST00000520804 WDR4P57081 412 aaKnown RBP17.24■□□□□ 0.35
PABPC1-215ENST00000520804 TSPO2Q5TGU0 170 aa17.24■□□□□ 0.35
PABPC1-215ENST00000520804 C9orf135Q5VTT2 229 aa17.24■□□□□ 0.35
PABPC1-215ENST00000520804 ZNF440Q8IYI8 595 aa17.24■□□□□ 0.35
PABPC1-215ENST00000520804 FBXL14Q8N1E6 418 aa17.24■□□□□ 0.35
PABPC1-215ENST00000520804 DEPDC4Q8N2C3 294 aa17.24■□□□□ 0.35
PABPC1-215ENST00000520804 MUC15Q8N387 334 aa17.24■□□□□ 0.35
PABPC1-215ENST00000520804 C17orf78Q8N4C9 275 aa17.24■□□□□ 0.35
PABPC1-215ENST00000520804 TMEM45BQ96B21 275 aa17.24■□□□□ 0.35
PABPC1-215ENST00000520804 RHNO1Q9BSD3 238 aa17.24■□□□□ 0.35
PABPC1-215ENST00000520804 C1QTNF6Q9BXI9 259 aa17.24■□□□□ 0.35
PABPC1-215ENST00000520804 P2RX2Q9UBL9 471 aa17.24■□□□□ 0.35
PABPC1-215ENST00000520804 DSPPQ9NZW4 1301 aa17.23■□□□□ 0.35
PABPC1-215ENST00000520804 CDHR4A6H8M9 788 aa17.23■□□□□ 0.35
PABPC1-215ENST00000520804 IL6P05231 212 aa17.23■□□□□ 0.35
PABPC1-215ENST00000520804 FABP6P51161 128 aa17.23■□□□□ 0.35
PABPC1-215ENST00000520804 NUDT6P53370 316 aa17.23■□□□□ 0.35
PABPC1-215ENST00000520804 MVDP53602 400 aa17.23■□□□□ 0.35
PABPC1-215ENST00000520804 TGFBR3Q03167 851 aa17.23■□□□□ 0.35
PABPC1-215ENST00000520804 CEACAM7Q14002 265 aa17.23■□□□□ 0.35
PABPC1-215ENST00000520804 PDCD4Q53EL6 469 aaKnown RBP17.23■□□□□ 0.35
PABPC1-215ENST00000520804 OTUD3Q5T2D3 398 aaPredicted RBP17.23■□□□□ 0.35
PABPC1-215ENST00000520804 VRK2Q86Y07 508 aa17.23■□□□□ 0.35
PABPC1-215ENST00000520804 SLC17A5Q9NRA2 495 aa17.23■□□□□ 0.35
PABPC1-215ENST00000520804 SLC6A13Q9NSD5 602 aa17.23■□□□□ 0.35
PABPC1-215ENST00000520804 PRDM4Q9UKN5 801 aa17.23■□□□□ 0.35
PABPC1-215ENST00000520804 AMDHD2Q9Y303 409 aa17.23■□□□□ 0.35
PABPC1-215ENST00000520804 IGHV4-30-2A0A087WSY4 118 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 TMEM120BA0PK00 339 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 LIPT2A6NK58 231 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 SLCO1B7G3V0H7 640 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 SLC22A3O75751 556 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 AKR7A3O95154 331 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 GPIP06744 558 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 GKN3PP0CG01 181 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 KITP10721 976 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 ETFAP13804 333 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 IDO1P14902 403 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 CXCR1P25024 350 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 MPGP29372 298 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 ACAA2P42765 397 aaKnown RBP17.22■□□□□ 0.35
PABPC1-215ENST00000520804 SLC25A3Q00325 362 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 OR7A5Q15622 319 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 LIN52Q52LA3 116 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 C1QTNF12Q5T7M4 302 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 ZNF544Q6NX49 715 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 ZNF836Q6ZNA1 936 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 TMEM99Q8N816 258 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 ZIC4Q8N9L1 334 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 OR10H5Q8NGA6 315 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 OR9K2Q8NGE7 335 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 OR52P1PQ8NH57 321 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 MAELQ96JY0 434 aaKnown RBP17.22■□□□□ 0.35
PABPC1-215ENST00000520804 SF3B5Q9BWJ5 86 aaKnown RBP17.22■□□□□ 0.35
PABPC1-215ENST00000520804 CALML5Q9NZT1 146 aa17.22■□□□□ 0.35
PABPC1-215ENST00000520804 ABCA1O95477 2261 aa17.21■□□□□ 0.35
PABPC1-215ENST00000520804 TFPTP0C1Z6 253 aa17.21■□□□□ 0.35
PABPC1-215ENST00000520804 ZCCHC18P0CG32 403 aa17.21■□□□□ 0.35
PABPC1-215ENST00000520804 DSCR9P59020 149 aa17.21■□□□□ 0.35
PABPC1-215ENST00000520804 RNF220Q5VTB9 566 aa17.21■□□□□ 0.35
PABPC1-215ENST00000520804 NXNQ6DKJ4 435 aa17.21■□□□□ 0.35
PABPC1-215ENST00000520804 WBP2NLQ6ICG8 309 aa17.21■□□□□ 0.35
PABPC1-215ENST00000520804 CLEC2AQ6UVW9 174 aa17.21■□□□□ 0.35
PABPC1-215ENST00000520804 CXXC5Q7LFL8 322 aaKnown RBP17.21■□□□□ 0.35
PABPC1-215ENST00000520804 AAED1Q7RTV5 226 aa17.21■□□□□ 0.35
PABPC1-215ENST00000520804 ZNF385AQ96PM9 386 aaKnown RBP17.21■□□□□ 0.35
PABPC1-215ENST00000520804 PIF1Q9H611 641 aa17.21■□□□□ 0.35
PABPC1-215ENST00000520804 FKRPQ9H9S5 495 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms