RNA–Protein interactions for RNA: ENST00000519656.1

EFR3A-202, Transcript of EFR3 homolog A, humanhuman

TSL 1 (best) BASIC

Gene EFR3A, Length 5,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-202ENST00000519656 LIM2P55344 173 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 C21orf58P58505 322 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 TAS2R40P59535 323 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 XIAPP98170 497 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 SLC25A11Q02978 314 aaKnown RBP2.54□□□□□ -2
EFR3A-202ENST00000519656 MVKQ03426 396 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 BTKQ06187 659 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 IFFO1Q0D2I5 559 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 TRAF3Q13114 568 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 SPRED3Q2MJR0 410 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 KHDC1Q4VXA5 237 aaKnown RBP2.54□□□□□ -2
EFR3A-202ENST00000519656 DCST1Q5T197 706 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 LRIF1Q5T3J3 769 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 RNASEH2BQ5TBB1 312 aaKnown RBP2.54□□□□□ -2
EFR3A-202ENST00000519656 GRTP1Q5TC63 336 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 GPR107Q5VW38 600 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 ZNF836Q6ZNA1 936 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 CXorf67Q86X51 503 aaPredicted RBP2.54□□□□□ -2
EFR3A-202ENST00000519656 TMEM86BQ8N661 226 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 LILRA3Q8N6C8 439 aaPredicted RBP2.54□□□□□ -2
EFR3A-202ENST00000519656 RELL2Q8NC24 303 aaPredicted RBP2.54□□□□□ -2
EFR3A-202ENST00000519656 OR56A3Q8NH54 315 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.54□□□□□ -23e-9■■■■■ 80.2
EFR3A-202ENST00000519656 TMBIM1Q969X1 311 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 PEBP4Q96S96 227 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 CPNE1Q99829 537 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 DCTN5Q9BTE1 182 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 CCDC106Q9BWC9 280 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 ULBP2Q9BZM5 246 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 MYLK2Q9H1R3 596 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 TMEM185BQ9H7F4 350 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 SEPSECSQ9HD40 501 aaKnown RBP2.54□□□□□ -2
EFR3A-202ENST00000519656 CHRAC1Q9NRG0 131 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 TBC1D23Q9NUY8 699 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 SLC7A8Q9UHI5 535 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 RASD1Q9Y272 281 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 PPIAL4AQ9Y536 164 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 FREM3P0C091 2139 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 CEP192Q8TEP8 1941 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 LOC100653049A0A140TA62 436 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 hCG_1807616A0A1W2PRN6 198 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 RAB19A4D1S5 217 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 OR51F1A6NGY5 319 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 ANXA2P2A6NMY6 339 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 SEC22BO75396 215 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 KRT34O76011 436 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 GPANK1O95872 356 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 OR4A8P0C604 315 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 IVDP26440 423 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 PPOXP50336 477 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 CTXN1P60606 82 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 SLC35A2P78381 396 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 CEACAM21Q3KPI0 293 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 GPAT3Q53EU6 434 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 LYRM7Q5U5X0 104 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 STAC2Q6ZMT1 411 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 ZNF813Q6ZN06 617 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 ZNF572Q7Z3I7 529 aaPredicted RBP2.54□□□□□ -2
EFR3A-202ENST00000519656 UEVLDQ8IX04 471 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 PNLDC1Q8NA58 520 aaKnown RBP2.54□□□□□ -2
EFR3A-202ENST00000519656 OR4C15Q8NGM1 316 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 OIT3Q8WWZ8 545 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 THRSPQ92748 146 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 S100PBPQ96BU1 408 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 PPP3R2Q96LZ3 170 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 NR1H4Q96RI1 486 aaPredicted RBP2.54□□□□□ -2
EFR3A-202ENST00000519656 NUDT16L1Q9BRJ7 211 aaKnown RBP2.54□□□□□ -2
EFR3A-202ENST00000519656 RMND5AQ9H871 391 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 VIPAS39Q9H9C1 493 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 TMCC3Q9ULS5 477 aa2.54□□□□□ -2
EFR3A-202ENST00000519656 RRP15Q9Y3B9 282 aaKnown RBP2.54□□□□□ -2
EFR3A-202ENST00000519656 PTPRBP23467 1997 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 LOC102725191A0A1B0GVB3 256 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 ELOVL7A1L3X0 281 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 AURKAO14965 403 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 PCDH7O60245 1069 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 ZNF354AO60765 605 aaPredicted RBP2.53□□□□□ -2
EFR3A-202ENST00000519656 SASH3O75995 380 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 PRPS1L1P21108 318 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 HSD17B3P37058 310 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 CSNK1A1P48729 337 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 SERPINB8P50452 374 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 HILS1P60008 231 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 MRPS35P82673 323 aaKnown RBP2.53□□□□□ -2
EFR3A-202ENST00000519656 MRPS11P82912 194 aaKnown RBP2.53□□□□□ -2
EFR3A-202ENST00000519656 SLC18A2Q05940 514 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 MAP4K2Q12851 820 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 STX3Q13277 289 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 RUSC1-AS1Q66K80 236 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 DEF8Q6ZN54 512 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 NUFIP2Q7Z417 695 aaKnown RBP2.53□□□□□ -2
EFR3A-202ENST00000519656 MIER2Q8N344 545 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 CCDC197Q8NCU1 140 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 BBS1Q8NFJ9 593 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 OR52R1Q8NGF1 315 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 LRRN4Q8WUT4 740 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 ATG4AQ8WYN0 398 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 LPGAT1Q92604 370 aa2.53□□□□□ -2
EFR3A-202ENST00000519656 METTL2AQ96IZ6 378 aaKnown RBP2.53□□□□□ -2
EFR3A-202ENST00000519656 MTERF1Q99551 399 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms