RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	FAM98A	Q8NCA5	519 aa	Known RBP	11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	NPEPL1	Q8NDH3	523 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	OR5W2	Q8NH69	310 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	NEIL3	Q8TAT5	605 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	SAP25	Q8TEE9	199 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	AP3S1	Q92572	193 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	KLHDC3	Q9BQ90	382 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	NMNAT2	Q9BZQ4	307 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	ADAM19	Q9H013	955 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	COPS7A	Q9UBW8	275 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	MUTYH	Q9UIF7	546 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	SRPK3	Q9UPE1	567 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	NOX1	Q9Y5S8	564 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	FER1L5	A0AVI2	2057 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	CDC14C	A4D256	554 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	CD8B2	A6NJW9	211 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	OR6C76	A6NM76	312 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	ALG1L2	C9J202	215 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362		E9PI62	339 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	CASK	O14936	926 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	IDH3B	O43837	385 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	RGS9	O75916	674 aa	Predicted RBP	11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	ASAH2B	P0C7U1	165 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	CD8B	P10966	210 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	IL12B	P29460	328 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	RPL4	P36578	427 aa	Known RBP	11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	SLC6A8	P48029	635 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	NR0B1	P51843	470 aa	Known RBP	11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	ZNF117	Q03924	483 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	GXYLT1	Q4G148	440 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	DDI2	Q5TDH0	399 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	HLA-DQA1	Q5Y7H0	255 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	PMS2CL	Q68D20	193 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	GUSBP11	Q6P575	273 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	VASH1	Q7L8A9	365 aa	Predicted RBP	11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	PRSS58	Q8IYP2	241 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	CADM3	Q8N126	398 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	LRRC75A	Q8NAA5	344 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	POMGNT2	Q8NAT1	580 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	C17orf47	Q8NEP4	570 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	SMAP2	Q8WU79	429 aa	Predicted RBP	11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	MOGAT1	Q96PD6	335 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	SRR	Q9GZT4	340 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	MMP25	Q9NPA2	562 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	PRDM6	Q9NQX0	595 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	ZNF229	Q9UJW7	825 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	PILRB	Q9UKJ0	227 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	UNC13C	Q8NB66	2214 aa		11.29	□□□□□ -0.6
SPIDR-210	ENST00000519362	TNRC6B	Q9UPQ9	1833 aa	Known RBP	11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362		A0A1W2PQM1	296 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	SMIM30	A4D0T7	59 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	OR6C68	A6NDL8	312 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	BOLA2-SMG1P6	H3BVE0	249 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	DVL2	O14641	736 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	TF	P02787	698 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	TDGF1	P13385	188 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	APEH	P13798	732 aa	Known RBP	11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	ABCD3	P28288	659 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	GRK6	P43250	576 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	PNLIPRP2	P54317	469 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	CAV3	P56539	151 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	OR12D2	P58182	307 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	TAS2R43	P59537	309 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	LTB	Q06643	244 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	PLCXD2	Q0VAA5	305 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	KRR1	Q13601	381 aa	Known RBP	11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	NR0B2	Q15466	257 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	ZMAT1	Q5H9K5	638 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	LANCL3	Q6ZV70	420 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	SSX6	Q7RTT6	188 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	SLC29A4	Q7RTT9	530 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	RABEPK	Q7Z6M1	372 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	SLC38A9	Q8NBW4	561 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	MOSPD2	Q8NHP6	518 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	ZNRF4	Q8WWF5	429 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	ZMYND19	Q96E35	227 aa	Predicted RBP	11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	C4orf36	Q96KX1	117 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	NMNAT3	Q96T66	252 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	KCNN2	Q9H2S1	579 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	NANS	Q9NR45	359 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	SPEG	Q15772	3267 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	RP1	P56715	2156 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	EIF4E2	O60573	245 aa	Known RBP	11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	SC5D	O75845	299 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	OR2T7	P0C7T2	308 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	TACR3	P29371	465 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	UQCRC1	P31930	480 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	AQP2	P41181	271 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	DIO1	P49895	249 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	DEFA1	P59665	94 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	DEFA3	P59666	94 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	ERVK-25	P63136	954 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	ACY1	Q03154	408 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	TRAM1	Q15629	374 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	SLC35D3	Q5M8T2	416 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	LCN1P1	Q5VSP4	162 aa		11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	DMKN	Q6E0U4	476 aa	Predicted RBP	11.28	□□□□□ -0.6
SPIDR-210	ENST00000519362	FAM122B	Q7Z309	247 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms