RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 DCTN4Q9UJW0 460 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 MAGED1Q9Y5V3 778 aaPredicted RBP13.9□□□□□ -0.18
MRPS28-204ENST00000519120 FLVCR1Q9Y5Y0 555 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 SLC25A15Q9Y619 301 aa13.9□□□□□ -0.18
MRPS28-204ENST00000519120 A0A0G2JPF8 293 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 FAM234BA2RU67 622 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 TMEM247A6NEH6 219 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 HNRNPCL2B2RXH8 293 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 HNRNPCL3B7ZW38 293 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 SMAD7O15105 426 aaKnown RBP13.89□□□□□ -0.19
MRPS28-204ENST00000519120 HNRNPCL1O60812 293 aaKnown RBP13.89□□□□□ -0.19
MRPS28-204ENST00000519120 RAD51DO75771 328 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 BCHEP06276 602 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 GPIP06744 558 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 HNRNPCL4P0DMR1 293 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 BMP2P12643 396 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 CCNA2P20248 432 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 CXCR1P25024 350 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 ACAA2P42765 397 aaKnown RBP13.89□□□□□ -0.19
MRPS28-204ENST00000519120 CRATP43155 626 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 POLR2JP52435 117 aaKnown RBP13.89□□□□□ -0.19
MRPS28-204ENST00000519120 LARS2Q15031 903 aaKnown RBP13.89□□□□□ -0.19
MRPS28-204ENST00000519120 GABRA6Q16445 453 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 WBP2NLQ6ICG8 309 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 KLHL17Q6TDP4 642 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 ZNF836Q6ZNA1 936 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 MIER2Q8N344 545 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 NEUROG1Q92886 237 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 ZBTB9Q96C00 473 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 BOD1Q96IK1 185 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 OR52B2Q96RD2 323 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 SPATA9Q9BWV2 254 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 RAD21L1Q9H4I0 556 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 BARX1Q9HBU1 254 aaPredicted RBP13.89□□□□□ -0.19
MRPS28-204ENST00000519120 BCL2L10Q9HD36 194 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 RLIMQ9NVW2 624 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 ZNF232Q9UNY5 417 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 ZNF443Q9Y2A4 671 aaPredicted RBP13.89□□□□□ -0.19
MRPS28-204ENST00000519120 IFT52Q9Y366 437 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 PRR14LQ5THK1 2151 aa13.89□□□□□ -0.19
MRPS28-204ENST00000519120 A0A096LPI6 279 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 ZC3H12DA2A288 527 aaKnown RBP13.88□□□□□ -0.19
MRPS28-204ENST00000519120 LIPT2A6NK58 231 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 CCT8L1PA6NM43 557 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 ABCD4O14678 606 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 TGDSO95455 350 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 IGHV3-9P01782 118 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 ITGA5P08648 1049 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 CDH11P55287 796 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 COPZ1P61923 177 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 TGFBR3Q03167 851 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 FAPQ12884 760 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 FADDQ13158 208 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 TNK1Q13470 666 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 CLEC12BQ2HXU8 276 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 OTUD3Q5T2D3 398 aaPredicted RBP13.88□□□□□ -0.19
MRPS28-204ENST00000519120 CASP12Q6UXS9 341 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 VRK2Q86Y07 508 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 GTF2H4Q92759 462 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 DNAJA3Q96EY1 480 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 TMEM19Q96HH6 336 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 C7orf26Q96N11 449 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 ALG2Q9H553 416 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 CACYBPQ9HB71 228 aaKnown RBP13.88□□□□□ -0.19
MRPS28-204ENST00000519120 USH1CQ9Y6N9 552 aa13.88□□□□□ -0.19
MRPS28-204ENST00000519120 FN1P02751 2386 aaKnown RBP13.87□□□□□ -0.19
MRPS28-204ENST00000519120 AQP7P3A6NL99 342 aa13.87□□□□□ -0.19
MRPS28-204ENST00000519120 A8MVM7 634 aa13.87□□□□□ -0.19
MRPS28-204ENST00000519120 VAMP5O95183 116 aa13.87□□□□□ -0.19
MRPS28-204ENST00000519120 CD8AP01732 235 aa13.87□□□□□ -0.19
MRPS28-204ENST00000519120 HOXB9P17482 250 aaPredicted RBP13.87□□□□□ -0.19
MRPS28-204ENST00000519120 NRF1Q16656 503 aa13.87□□□□□ -0.19
MRPS28-204ENST00000519120 C6orf10Q5SRN2 563 aa13.87□□□□□ -0.19
MRPS28-204ENST00000519120 AGBL2Q5U5Z8 902 aa13.87□□□□□ -0.19
MRPS28-204ENST00000519120 AGAP6Q5VW22 663 aa13.87□□□□□ -0.19
MRPS28-204ENST00000519120 EPGNQ6UW88 154 aa13.87□□□□□ -0.19
MRPS28-204ENST00000519120 DNM1P46Q6ZS02 220 aa13.87□□□□□ -0.19
MRPS28-204ENST00000519120 OR9I1Q8NGQ6 314 aa13.87□□□□□ -0.19
MRPS28-204ENST00000519120 OR52N5Q8NH56 324 aa13.87□□□□□ -0.19
MRPS28-204ENST00000519120 VPS33AQ96AX1 596 aa13.87□□□□□ -0.19
MRPS28-204ENST00000519120 PAIP1Q9H074 479 aaKnown RBP13.87□□□□□ -0.19
MRPS28-204ENST00000519120 SLCO5A1Q9H2Y9 848 aa13.87□□□□□ -0.19
MRPS28-204ENST00000519120 A4GALTQ9NPC4 353 aa13.87□□□□□ -0.19
MRPS28-204ENST00000519120 SLC7A10Q9NS82 523 aa13.87□□□□□ -0.19
MRPS28-204ENST00000519120 TMEM45AQ9NWC5 275 aa13.87□□□□□ -0.19
MRPS28-204ENST00000519120 UPB1Q9UBR1 384 aa13.87□□□□□ -0.19
MRPS28-204ENST00000519120 AMDHD2Q9Y303 409 aa13.87□□□□□ -0.19
MRPS28-204ENST00000519120 USF3Q68DE3 2245 aa13.86□□□□□ -0.19
MRPS28-204ENST00000519120 NPIPB7O75200 414 aa13.86□□□□□ -0.19
MRPS28-204ENST00000519120 GKN3PP0CG01 181 aa13.86□□□□□ -0.19
MRPS28-204ENST00000519120 PAX7P23759 505 aa13.86□□□□□ -0.19
MRPS28-204ENST00000519120 CD40P25942 277 aa13.86□□□□□ -0.19
MRPS28-204ENST00000519120 MPGP29372 298 aa13.86□□□□□ -0.19
MRPS28-204ENST00000519120 STX1BP61266 288 aa13.86□□□□□ -0.19
MRPS28-204ENST00000519120 IRX1P78414 480 aaPredicted RBP13.86□□□□□ -0.19
MRPS28-204ENST00000519120 PPP2R2BQ00005 443 aa13.86□□□□□ -0.19
MRPS28-204ENST00000519120 CEACAM7Q14002 265 aa13.86□□□□□ -0.19
MRPS28-204ENST00000519120 VEZF1Q14119 521 aa13.86□□□□□ -0.19
MRPS28-204ENST00000519120 RGNQ15493 299 aa13.86□□□□□ -0.19
MRPS28-204ENST00000519120 GTDC1Q4AE62 458 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms