RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 KRT6AP02538 564 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 CAPN1P07384 714 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 GPR89BP0CG08 455 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 HTR1FP30939 366 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 RBMXP38159 391 aaKnown RBP3.01□□□□□ -1.93
SQLE-202ENST00000518604 CASP4P49662 377 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 PKNOX1P55347 436 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 SELENOTP62341 195 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 KLRB1Q12918 225 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 GPM6BQ13491 265 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 SAMD4BQ5PRF9 694 aaKnown RBP3.01□□□□□ -1.93
SQLE-202ENST00000518604 C1orf100Q5SVJ3 147 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 RNF165Q6ZSG1 346 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 CCDC65Q8IXS2 484 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 RDH10Q8IZV5 341 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 FAM133AQ8N9E0 248 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 IPMKQ8NFU5 416 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 RBM14Q96PK6 669 aaKnown RBP3.01□□□□□ -1.93
SQLE-202ENST00000518604 CRACR2AQ9BSW2 395 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 NT5C3AQ9H0P0 336 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 VCPKMTQ9H867 229 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 GORASP2Q9H8Y8 452 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 NHEJ1Q9H9Q4 299 aaPredicted RBP3.01□□□□□ -1.93
SQLE-202ENST00000518604 MMP26Q9NRE1 261 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 MEMO1Q9Y316 297 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 LRRK1Q38SD2 2015 aa3.01□□□□□ -1.93
SQLE-202ENST00000518604 IGKV1D-8A0A087WSZ0 117 aa3□□□□□ -1.93
SQLE-202ENST00000518604 PANO1I0J062 215 aa3□□□□□ -1.93
SQLE-202ENST00000518604 STAMBPO95630 424 aa3□□□□□ -1.93
SQLE-202ENST00000518604 RBMY1CP0DJD4 496 aa3□□□□□ -1.93
SQLE-202ENST00000518604 CCNE1P24864 410 aa3□□□□□ -1.93
SQLE-202ENST00000518604 IL12AP29459 219 aa3□□□□□ -1.93
SQLE-202ENST00000518604 GNA11P29992 359 aa3□□□□□ -1.93
SQLE-202ENST00000518604 SHMT2P34897 504 aa3□□□□□ -1.93
SQLE-202ENST00000518604 DDOSTP39656 456 aa3□□□□□ -1.93
SQLE-202ENST00000518604 GLP1RP43220 463 aa3□□□□□ -1.93
SQLE-202ENST00000518604 SSR1P43307 286 aaKnown RBP3□□□□□ -1.93
SQLE-202ENST00000518604 KLK7P49862 253 aa3□□□□□ -1.93
SQLE-202ENST00000518604 GBX2P52951 348 aaPredicted RBP3□□□□□ -1.93
SQLE-202ENST00000518604 DLX1P56177 255 aa3□□□□□ -1.93
SQLE-202ENST00000518604 TAS2R19P59542 299 aa3□□□□□ -1.93
SQLE-202ENST00000518604 CKAP4Q07065 602 aaKnown RBP3□□□□□ -1.93
SQLE-202ENST00000518604 DAZ2Q13117 558 aaKnown RBP3□□□□□ -1.93
SQLE-202ENST00000518604 VGLL4Q14135 290 aa3□□□□□ -1.93
SQLE-202ENST00000518604 CAPRIN1Q14444 709 aaKnown RBP3□□□□□ -1.93
SQLE-202ENST00000518604 GRB7Q14451 532 aa3□□□□□ -1.93
SQLE-202ENST00000518604 MPPED2Q15777 294 aa3□□□□□ -1.93
SQLE-202ENST00000518604 MICBQ29980 383 aa3□□□□□ -1.93
SQLE-202ENST00000518604 GPRC6AQ5T6X5 926 aa3□□□□□ -1.93
SQLE-202ENST00000518604 TIGD3Q6B0B8 471 aa3□□□□□ -1.93
SQLE-202ENST00000518604 OR4F3Q6IEY1 312 aa3□□□□□ -1.93
SQLE-202ENST00000518604 TMIGD1Q6UXZ0 262 aa3□□□□□ -1.93
SQLE-202ENST00000518604 HSDL2Q6YN16 418 aa3□□□□□ -1.93
SQLE-202ENST00000518604 KRTAP11-1Q8IUC1 163 aa3□□□□□ -1.93
SQLE-202ENST00000518604 C20orf203Q8NBC4 194 aa3□□□□□ -1.93
SQLE-202ENST00000518604 SUMF2Q8NBJ7 301 aa3□□□□□ -1.93
SQLE-202ENST00000518604 OR4K14Q8NGD5 310 aa3□□□□□ -1.93
SQLE-202ENST00000518604 TM4SF19Q96DZ7 209 aa3□□□□□ -1.93
SQLE-202ENST00000518604 P2RY13Q9BPV8 354 aa3□□□□□ -1.93
SQLE-202ENST00000518604 C20orf85Q9H1P6 137 aa3□□□□□ -1.93
SQLE-202ENST00000518604 RAB18Q9NP72 206 aa3□□□□□ -1.93
SQLE-202ENST00000518604 DAZ3Q9NR90 486 aaKnown RBP3□□□□□ -1.93
SQLE-202ENST00000518604 SMPD3Q9NY59 655 aaPredicted RBP3□□□□□ -1.93
SQLE-202ENST00000518604 EXTL2Q9UBQ6 330 aa3□□□□□ -1.93
SQLE-202ENST00000518604 TMCO1Q9UM00 188 aa3□□□□□ -1.93
SQLE-202ENST00000518604 ATP10AO60312 1499 aa3□□□□□ -1.93
SQLE-202ENST00000518604 A0A1B0GUA9 196 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 A6NIZ1 184 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 LOC110117498-PIK3R3F6TDL0 507 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 P04436 131 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 KLK3P07288 261 aaPredicted RBP2.99□□□□□ -1.93
SQLE-202ENST00000518604 NPR2P20594 1047 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 MDKP21741 143 aaPredicted RBP2.99□□□□□ -1.93
SQLE-202ENST00000518604 CMA1P23946 247 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 CCT3P49368 545 aaKnown RBP2.99□□□□□ -1.93
SQLE-202ENST00000518604 ARRB1P49407 418 aaPredicted RBP2.99□□□□□ -1.93
SQLE-202ENST00000518604 CEBPDP49716 269 aaPredicted RBP2.99□□□□□ -1.93
SQLE-202ENST00000518604 HNMTP50135 292 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 ZNF133P52736 654 aaPredicted RBP2.99□□□□□ -1.93
SQLE-202ENST00000518604 RAP1BP61224 184 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 TGFBR3Q03167 851 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 FGL1Q08830 312 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 ZNF763Q0D2J5 394 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 KLHL38Q2WGJ6 581 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 PRSS41Q7RTY9 318 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 MKXQ8IYA7 352 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 C6orf223Q8N319 242 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 FBXO30Q8TB52 745 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 MYDGFQ969H8 173 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 SLC41A3Q96GZ6 507 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 ZNF414Q96IQ9 312 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 RPRD1AQ96P16 312 aaPredicted RBP2.99□□□□□ -1.93
SQLE-202ENST00000518604 CLCC1Q96S66 551 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 CCT7Q99832 543 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 SLC39A3Q9BRY0 314 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 TMEM43Q9BTV4 400 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 HES7Q9BYE0 225 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 RBKSQ9H477 322 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 PTBP2Q9UKA9 531 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms