RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 YWHABP31946 246 aaKnown RBP2.71□□□□□ -1.98
VPS13B-207ENST00000518569 EVI2BP34910 448 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 RORAP35398 523 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 CRATP43155 626 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 XCR1P46094 333 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 ALDH3B2P48448 385 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 C21orf59P57076 290 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 MRPS6P82932 125 aaKnown RBP2.71□□□□□ -1.98
VPS13B-207ENST00000518569 CBX1P83916 185 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 SRYQ05066 204 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 LIPEQ05469 1076 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 TGM3Q08188 693 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 IFFO1Q0D2I5 559 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 ZP4Q12836 540 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 MERTKQ12866 999 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 SLC10A1Q14973 349 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 GSG1Q2KHT4 349 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 CYBRD1Q53TN4 286 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 PDZK1Q5T2W1 519 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 PRAMEF5Q5TYX0 476 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 PRAMEF6Q5VXH4 476 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 RAET1LQ5VY80 246 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 NCR3LG1Q68D85 454 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 THOC7Q6I9Y2 204 aaKnown RBP2.71□□□□□ -1.98
VPS13B-207ENST00000518569 TWF2Q6IBS0 349 aaKnown RBP2.71□□□□□ -1.98
VPS13B-207ENST00000518569 ZNF562Q6V9R5 426 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 FRA10AC1Q70Z53 315 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 PRSS48Q7RTY5 328 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 P4HA3Q7Z4N8 544 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 LINC00523Q86TU6 105 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 LRRC6Q86X45 466 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 PLCZ1Q86YW0 608 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 UBQLNLQ8IYU4 475 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 FAM58AQ8N1B3 248 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 ASCC1Q8N9N2 400 aaKnown RBP2.71□□□□□ -1.98
VPS13B-207ENST00000518569 FNDC5Q8NAU1 212 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 OR4C5Q8NGB2 326 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 OR2T3Q8NH03 318 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 ZNF461Q8TAF7 563 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 PINX1Q96BK5 328 aaKnown RBP2.71□□□□□ -1.98
VPS13B-207ENST00000518569 CEP19Q96LK0 163 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 OR5M11Q96RB7 305 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 C9orf16Q9BUW7 83 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 ALG12Q9BV10 488 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 FRMD8P1Q9BZ68 369 aaPredicted RBP2.71□□□□□ -1.98
VPS13B-207ENST00000518569 IL22Q9GZX6 179 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 SLITRK2Q9H156 845 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 SAV1Q9H4B6 383 aaPredicted RBP2.71□□□□□ -1.98
VPS13B-207ENST00000518569 RANBP3Q9H6Z4 567 aaPredicted RBP2.71□□□□□ -1.98
VPS13B-207ENST00000518569 DMAP1Q9NPF5 467 aaPredicted RBP2.71□□□□□ -1.98
VPS13B-207ENST00000518569 DCAF13Q9NV06 445 aaKnown RBP2.71□□□□□ -1.98
VPS13B-207ENST00000518569 VNN3Q9NY84 501 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 RBAKQ9NYW8 714 aaPredicted RBP2.71□□□□□ -1.98
VPS13B-207ENST00000518569 ATXN10Q9UBB4 475 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 RNF14Q9UBS8 474 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 GHRLQ9UBU3 117 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 SEC14L3Q9UDX4 400 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 HMGXB4Q9UGU5 601 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 IL20RAQ9UHF4 553 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 PSMD13Q9UNM6 376 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 KLF2Q9Y5W3 355 aaPredicted RBP2.71□□□□□ -1.98
VPS13B-207ENST00000518569 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.71□□□□□ -1.98
VPS13B-207ENST00000518569 ADAMTS9Q9P2N4 1935 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 KDM5BQ9UGL1 1544 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 FRMPD4Q14CM0 1322 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 FANCIQ9NVI1 1328 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 MAPK8IP3Q9UPT6 1336 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 WRNQ14191 1432 aaPredicted RBP eCLIP2.7□□□□□ -1.98
VPS13B-207ENST00000518569 UHRF1BP1Q6BDS2 1440 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 UACAQ9BZF9 1416 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 ZFYVE16Q7Z3T8 1539 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 ARAP3Q8WWN8 1544 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 ESYT2A0FGR8 921 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 TMEM120BA0PK00 339 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 MBLAC1A4D2B0 266 aaPredicted RBP2.7□□□□□ -1.98
VPS13B-207ENST00000518569 GOLGA6L10A6NI86 522 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 ANKRD30BLA7E2S9 258 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 A8MXQ7 604 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CENPBD1B2RD01 187 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CHADO15335 359 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 ADAM12O43184 909 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CALUO43852 315 aaPredicted RBP2.7□□□□□ -1.98
VPS13B-207ENST00000518569 SDC3O75056 442 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CLPXO76031 633 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 SCGNO76038 276 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 SLC2A10O95528 541 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 SNAI1O95863 264 aaPredicted RBP2.7□□□□□ -1.98
VPS13B-207ENST00000518569 KRT6AP02538 564 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CAPN1P07384 714 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 ALPIP09923 528 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 IQCF3P0C7M6 154 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 RRASP10301 218 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CYP11B1P15538 503 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 ZNF44P15621 663 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 FUT1P19526 365 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 NT5EP21589 574 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 PRDX6P30041 224 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 PRDX2P32119 198 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 POU3F4P49335 361 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 BCAP31P51572 246 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms