RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 TIMP4Q99727 224 aa24.19■■□□□ 1.46
COL13A1-210ENST00000517713 KCNS3Q9BQ31 491 aa24.19■■□□□ 1.46
COL13A1-210ENST00000517713 MMP25Q9NPA2 562 aa24.19■■□□□ 1.46
COL13A1-210ENST00000517713 A0A075B6Q4 140 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 BLOC1S5-TXNDC5H3BN57 136 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 TAF4O00268 1085 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 SULT1C4O75897 302 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 NUDT14O95848 222 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 CELP19835 753 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 POU4F2Q12837 409 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 IL11RAQ14626 422 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 TOMM34Q15785 309 aaPredicted RBP24.18■■□□□ 1.46
COL13A1-210ENST00000517713 ISXQ2M1V0 245 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 C16orf47Q6ZP98 133 aaPredicted RBP24.18■■□□□ 1.46
COL13A1-210ENST00000517713 SPSB2Q99619 263 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 BARHL1Q9BZE3 327 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 HIF3AQ9Y2N7 669 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 MEN1O00255 615 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 IDH3BO43837 385 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 CDRT1O95170 752 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 ERVK-25P63136 954 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 FABP5Q01469 135 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 BDH1Q02338 343 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 CBFBQ13951 182 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 CD200R1LQ6Q8B3 271 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 ATP6V1C2Q8NEY4 427 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 NUBPLQ8TB37 319 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 SMPDL3BQ92485 455 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 KTI12Q96EK9 354 aaPredicted RBP24.18■■□□□ 1.46
COL13A1-210ENST00000517713 KCTD7Q96MP8 289 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 KATNB1Q9BVA0 655 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 SLC26A1Q9H2B4 701 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 KLHL1Q9NR64 748 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 BABAM2Q9NXR7 383 aa24.18■■□□□ 1.46
COL13A1-210ENST00000517713 CRNNQ9UBG3 495 aaPredicted RBP24.18■■□□□ 1.46
COL13A1-210ENST00000517713 IL1AP01583 271 aa24.17■■□□□ 1.46
COL13A1-210ENST00000517713 CXCR1P25024 350 aa24.17■■□□□ 1.46
COL13A1-210ENST00000517713 CD40LGP29965 261 aa24.17■■□□□ 1.46
COL13A1-210ENST00000517713 AQP2P41181 271 aa24.17■■□□□ 1.46
COL13A1-210ENST00000517713 LTBQ06643 244 aa24.17■■□□□ 1.46
COL13A1-210ENST00000517713 LPAL2Q16609 132 aa24.17■■□□□ 1.46
COL13A1-210ENST00000517713 NUP54Q7Z3B4 507 aa24.17■■□□□ 1.46
COL13A1-210ENST00000517713 CPEB2Q7Z5Q1 589 aaKnown RBP24.17■■□□□ 1.46
COL13A1-210ENST00000517713 LPAR4Q99677 370 aa24.17■■□□□ 1.46
COL13A1-210ENST00000517713 WDR77Q9BQA1 342 aaPredicted RBP24.17■■□□□ 1.46
COL13A1-210ENST00000517713 CRB3Q9BUF7 120 aa24.17■■□□□ 1.46
COL13A1-210ENST00000517713 GSTK1Q9Y2Q3 226 aa24.17■■□□□ 1.46
COL13A1-210ENST00000517713 TMEM221A6NGB7 291 aa24.17■■□□□ 1.46
COL13A1-210ENST00000517713 M0R296 226 aa24.17■■□□□ 1.46
COL13A1-210ENST00000517713 CDC40O60508 579 aaKnown RBP eCLIP24.17■■□□□ 1.46
COL13A1-210ENST00000517713 ASAH2BP0C7U1 165 aa24.17■■□□□ 1.46
COL13A1-210ENST00000517713 GP1BBP13224 206 aa24.17■■□□□ 1.46
COL13A1-210ENST00000517713 FGF9P31371 208 aaPredicted RBP24.17■■□□□ 1.46
COL13A1-210ENST00000517713 P2RX1P51575 399 aa24.17■■□□□ 1.46
COL13A1-210ENST00000517713 TRA2AQ13595 282 aaKnown RBP eCLIP24.17■■□□□ 1.46
COL13A1-210ENST00000517713 EFR3AQ14156 821 aa24.17■■□□□ 1.46
COL13A1-210ENST00000517713 NPEPL1Q8NDH3 523 aa24.17■■□□□ 1.46
COL13A1-210ENST00000517713 THAP3Q8WTV1 239 aaPredicted RBP24.17■■□□□ 1.46
COL13A1-210ENST00000517713 CHPT1Q8WUD6 406 aa24.17■■□□□ 1.46
COL13A1-210ENST00000517713 TRDV1A0A1B0GX56 115 aa24.16■■□□□ 1.46
COL13A1-210ENST00000517713 MAGEB3O15480 346 aa24.16■■□□□ 1.46
COL13A1-210ENST00000517713 CPNE3O75131 537 aaKnown RBP24.16■■□□□ 1.46
COL13A1-210ENST00000517713 IFITM3Q01628 133 aa24.16■■□□□ 1.46
COL13A1-210ENST00000517713 DCDC5Q6ZRR9 648 aa24.16■■□□□ 1.46
COL13A1-210ENST00000517713 SNX29P2Q8IUI4 249 aa24.16■■□□□ 1.46
COL13A1-210ENST00000517713 NMNAT3Q96T66 252 aa24.16■■□□□ 1.46
COL13A1-210ENST00000517713 TMED9Q9BVK6 235 aa24.16■■□□□ 1.46
COL13A1-210ENST00000517713 QPCTLQ9NXS2 382 aa24.16■■□□□ 1.46
COL13A1-210ENST00000517713 ASCC3Q8N3C0 2202 aaKnown RBP24.16■■□□□ 1.46
COL13A1-210ENST00000517713 TRBV11-1A0A0K0K1C0 115 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 GDF9O60383 454 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 RAB15P59190 212 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 ZNF45Q02386 682 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 MXD1Q05195 221 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 ATP1A4Q13733 1029 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 CENPSQ8N2Z9 138 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 LRRC75AQ8NAA5 344 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 AGBL5Q8NDL9 886 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 TAAR8Q969N4 342 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 RASD2Q96D21 266 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 DDOQ99489 341 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 TPK1Q9H3S4 243 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 SMOC1Q9H4F8 434 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 SPEGQ15772 3267 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 ACTC1P68032 377 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 ACTA1P68133 377 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 ZFP36L1Q07352 338 aaKnown RBP24.15■■□□□ 1.46
COL13A1-210ENST00000517713 LGALS3BPQ08380 585 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 ALG10Q5BKT4 473 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 MRPL14Q6P1L8 145 aaKnown RBP24.15■■□□□ 1.46
COL13A1-210ENST00000517713 POMZP3Q6PJE2 187 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 TMEM205Q6UW68 189 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 B4GALNT2Q8NHY0 566 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 DUSP19Q8WTR2 217 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 ATOH1Q92858 354 aaPredicted RBP24.15■■□□□ 1.46
COL13A1-210ENST00000517713 SLC25A46Q96AG3 418 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 ZMYND19Q96E35 227 aaPredicted RBP24.15■■□□□ 1.46
COL13A1-210ENST00000517713 COQ7Q99807 217 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 MED18Q9BUE0 208 aa24.15■■□□□ 1.46
COL13A1-210ENST00000517713 AKIRIN1Q9H9L7 192 aaPredicted RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms