RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711	PTN	P21246	168 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	PAICS	P22234	425 aa	Known RBP	10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	CXCR1	P25024	350 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	CD82	P27701	267 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	MAP2K4	P45985	399 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	MAP2K6	P52564	334 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	CDH11	P55287	796 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	FXYD6P3	P58550	94 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	SNTA1	Q13424	505 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	C1D	Q13901	141 aa	Known RBP	10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	QPRT	Q15274	297 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	ZNF74	Q16587	644 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	C3orf38	Q5JPI3	329 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	FAM69B	Q5VUD6	431 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	DHRS13	Q6UX07	377 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	DPY19L2P2	Q6ZN68	376 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	SLC46A3	Q7Z3Q1	461 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	ANKRD13B	Q86YJ7	626 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	RAB43	Q86YS6	212 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	ARMC10	Q8N2F6	343 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	GPR119	Q8TDV5	335 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	NMD3	Q96D46	503 aa	Known RBP	10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	MESP1	Q9BRJ9	268 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	MND1	Q9BWT6	205 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	METTL7A	Q9H8H3	244 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	FKRP	Q9H9S5	495 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	LIN28A	Q9H9Z2	209 aa	Known RBP	10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	MCCC2	Q9HCC0	563 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	AMBN	Q9NP70	447 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	PPP4R1L	Q9P1A2	415 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	ENPP5	Q9UJA9	477 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	ZNF229	Q9UJW7	825 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	DIMT1	Q9UNQ2	313 aa	Known RBP	10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	ERGIC3	Q9Y282	383 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	WIF1	Q9Y5W5	379 aa		10.88	□□□□□ -0.67
LMNA-224	ENST00000515711	TRAV36DV7	A0A075B6V5	113 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	TRAV27	A0A087WT01	109 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	FAM47E-STBD1	D6RA91	191 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	GNB5	O14775	395 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	MYL12B	O14950	172 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	INMT	O95050	263 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	CH25H	O95992	272 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	MT-ATP6	P00846	226 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	PEPD	P12955	493 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	APEH	P13798	732 aa	Known RBP	10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	MYL12A	P19105	171 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	HK1	P19367	917 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	FUT1	P19526	365 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	MST1	P26927	711 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	ACVR2A	P27037	513 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	C21orf33	P30042	268 aa	Predicted RBP	10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	HTR1F	P30939	366 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	MTNR1A	P48039	350 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	GAS1	P54826	345 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	RPS4X	P62701	263 aa	Known RBP	10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	CHAF1B	Q13112	559 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	DNASE1L3	Q13609	305 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	ZNF791	Q3KP31	576 aa	Predicted RBP	10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	AADACL4	Q5VUY2	407 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	DESI1	Q6ICB0	168 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	CXXC5	Q7LFL8	322 aa	Known RBP	10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	TIPARP	Q7Z3E1	657 aa	Known RBP	10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	PPP1R32	Q7Z5V6	425 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	ERI1	Q8IV48	349 aa	Known RBP	10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	OR6S1	Q8NH40	331 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	OR51A7	Q8NH64	312 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	STK35	Q8TDR2	534 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	ASB15	Q8WXK1	588 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	C12orf43	Q96C57	262 aa	Known RBP	10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	MYCBP	Q99417	103 aa	Predicted RBP	10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	RTN4R	Q9BZR6	473 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	GPN2	Q9H9Y4	310 aa	Predicted RBP	10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	CPNE5	Q9HCH3	593 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	FGF20	Q9NP95	211 aa	Predicted RBP	10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	NANS	Q9NR45	359 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	CHCHD3	Q9NX63	227 aa	Known RBP	10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	OSGIN1	Q9UJX0	560 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	HIF3A	Q9Y2N7	669 aa		10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	EXOSC1	Q9Y3B2	195 aa	Known RBP	10.87	□□□□□ -0.67
LMNA-224	ENST00000515711	TMED7-TICAM2	A0A0A6YYA0	188 aa		10.86	□□□□□ -0.67
LMNA-224	ENST00000515711	SPAAR	A0A1B0GVQ0	90 aa		10.86	□□□□□ -0.67
LMNA-224	ENST00000515711	SLC22A31	A6NKX4	558 aa		10.86	□□□□□ -0.67
LMNA-224	ENST00000515711		A8MVM7	634 aa		10.86	□□□□□ -0.67
LMNA-224	ENST00000515711	PRR23D1	E9PI22	279 aa	Predicted RBP	10.86	□□□□□ -0.67
LMNA-224	ENST00000515711		H3BMQ9	156 aa		10.86	□□□□□ -0.67
LMNA-224	ENST00000515711	STMND1	H3BQB6	276 aa		10.86	□□□□□ -0.67
LMNA-224	ENST00000515711	ETV2	O00321	342 aa	Predicted RBP	10.86	□□□□□ -0.67
LMNA-224	ENST00000515711	ADAM10	O14672	748 aa		10.86	□□□□□ -0.67
LMNA-224	ENST00000515711	ARPC3	O15145	178 aa		10.86	□□□□□ -0.67
LMNA-224	ENST00000515711	ZNF354A	O60765	605 aa	Predicted RBP	10.86	□□□□□ -0.67
LMNA-224	ENST00000515711	ITGA10	O75578	1167 aa		10.86	□□□□□ -0.67
LMNA-224	ENST00000515711	GABARAP	O95166	117 aa		10.86	□□□□□ -0.67
LMNA-224	ENST00000515711	PPP1R3D	O95685	299 aa		10.86	□□□□□ -0.67
LMNA-224	ENST00000515711	HIST1H2AB	P04908	130 aa		10.86	□□□□□ -0.67
LMNA-224	ENST00000515711	PRR23D2	P0DMB1	279 aa	Predicted RBP	10.86	□□□□□ -0.67
LMNA-224	ENST00000515711	CCNA2	P20248	432 aa		10.86	□□□□□ -0.67
LMNA-224	ENST00000515711	CSRP1	P21291	193 aa	Known RBP	10.86	□□□□□ -0.67
LMNA-224	ENST00000515711	NOS3	P29474	1203 aa		10.86	□□□□□ -0.67

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