RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	IMPDH2	P12268	514 aa		13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	PAX7	P23759	505 aa		13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	GIF	P27352	417 aa		13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	SRP14	P37108	136 aa	Known RBP	13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	PPOX	P50336	477 aa		13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	CHN2	P52757	468 aa		13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	KCNJ10	P78508	379 aa		13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	EFNB3	Q15768	340 aa		13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	ADIPOQ	Q15848	244 aa		13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	AP1AR	Q63HQ0	302 aa		13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	PAQR6	Q6TCH4	344 aa		13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	CLECL1	Q8IZS7	167 aa		13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	C4orf33	Q8N1A6	199 aa		13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	ROPN1L	Q96C74	230 aa		13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	KATNB1	Q9BVA0	655 aa		13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	SAP130	Q9H0E3	1048 aa		13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	TMEM45A	Q9NWC5	275 aa		13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	FBXO9	Q9UK97	447 aa	Predicted RBP	13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	TMED7	Q9Y3B3	224 aa		13.71	□□□□□ -0.21
LMNA-223	ENST00000515459	TMEM72	A0PK05	275 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	SMIM23	A6NLE4	172 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	WIPF1	O43516	503 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	SNUPN	O95149	360 aa	Known RBP	13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	STAMBP	O95630	424 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	SHBG	P04278	402 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	TACSTD2	P09758	323 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	G6PD	P11413	515 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	ALDH3A1	P30838	453 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	IDH3G	P51553	393 aa	Predicted RBP	13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	POLR2H	P52434	150 aa	Known RBP	13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	MAP2K6	P52564	334 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	ZSWIM7	Q19AV6	140 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	OR4F3	Q6IEY1	312 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	VHLL	Q6RSH7	139 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	FRRS1	Q6ZNA5	592 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	AAED1	Q7RTV5	226 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	LINC01356	Q8N9X3	169 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	HPS1	Q92902	700 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	RAB8B	Q92930	207 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	ZG16B	Q96DA0	208 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	AURKB	Q96GD4	344 aa	Predicted RBP	13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	SF3B5	Q9BWJ5	86 aa	Known RBP	13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	PLA2G12A	Q9BZM1	189 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	PLK3	Q9H4B4	646 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	PPCS	Q9HAB8	311 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	OSGIN1	Q9UJX0	560 aa		13.7	□□□□□ -0.22
LMNA-223	ENST00000515459	CLDN24	A6NM45	220 aa		13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	RNASET2	O00584	256 aa	Known RBP	13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	LILRA1	O75019	489 aa		13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	SKAP2	O75563	359 aa	Predicted RBP	13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	KRT33A	O76009	404 aa		13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	ERCC1	P07992	297 aa	Predicted RBP	13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	DAO	P14920	347 aa		13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	APEX1	P27695	318 aa	Known RBP	13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	CFP	P27918	469 aa		13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	TACR3	P29371	465 aa		13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	IL2RG	P31785	369 aa		13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	SLC1A3	P43003	542 aa		13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	CLDN8	P56748	225 aa		13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	UBE2N	P61088	152 aa	Known RBP	13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	NAAA	Q02083	359 aa		13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	PLAUR	Q03405	335 aa		13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	MAD2L1	Q13257	205 aa	Predicted RBP	13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	TBRG1	Q3YBR2	411 aa		13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	HMGN2P46	Q86SG4	172 aa		13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	ZIC4	Q8N9L1	334 aa		13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	OR9K2	Q8NGE7	335 aa		13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	OR4A15	Q8NGL6	344 aa		13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	OR1K1	Q8NGR3	316 aa		13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	NEU4	Q8WWR8	484 aa	Predicted RBP	13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	CNOT9	Q92600	299 aa	Known RBP	13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	TUBGCP3	Q96CW5	907 aa		13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	ZNF385A	Q96PM9	386 aa	Known RBP	13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	PIF1	Q9H611	641 aa		13.69	□□□□□ -0.22
LMNA-223	ENST00000515459	ZC3H12D	A2A288	527 aa	Known RBP	13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	AP3D1	O14617	1153 aa		13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	SPRY1	O43609	319 aa	Predicted RBP	13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	UQCRC2	P22695	453 aa		13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	HPCA	P84074	193 aa		13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	FUT5	Q11128	374 aa		13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	GPAT3	Q53EU6	434 aa		13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	ANKRD16	Q6P6B7	361 aa		13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	UGT2A3	Q6UWM9	527 aa		13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	GPAT4	Q86UL3	456 aa		13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	CMIP	Q8IY22	773 aa		13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	TMEM99	Q8N816	258 aa		13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	OR4F15	Q8NGB8	312 aa		13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	SNX18	Q96RF0	628 aa		13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	MECR	Q9BV79	373 aa		13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	ADAM19	Q9H013	955 aa		13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	NOP53	Q9NZM5	478 aa	Known RBP	13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	CRNN	Q9UBG3	495 aa	Predicted RBP	13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	METRN	Q9UJH8	293 aa		13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	PCDHB14	Q9Y5E9	798 aa		13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	DYSF	O75923	2080 aa		13.68	□□□□□ -0.22
LMNA-223	ENST00000515459	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.67	□□□□□ -0.22

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