RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 NANOGQ9H9S0 305 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 GID8Q9NWU2 228 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 RPS6KB2Q9UBS0 482 aa11.35□□□□□ -0.59
CLCN3-210ENST00000515420 AKAP6Q13023 2319 aa11.34□□□□□ -0.59
CLCN3-210ENST00000515420 ZC3H12DA2A288 527 aaKnown RBP11.34□□□□□ -0.59
CLCN3-210ENST00000515420 LIPT2A6NK58 231 aa11.34□□□□□ -0.59
CLCN3-210ENST00000515420 FRS3O43559 492 aa11.34□□□□□ -0.59
CLCN3-210ENST00000515420 FMO6PO60774 539 aa11.34□□□□□ -0.59
CLCN3-210ENST00000515420 CCDC22O60826 627 aa11.34□□□□□ -0.59
CLCN3-210ENST00000515420 PNMTP11086 282 aa11.34□□□□□ -0.59
CLCN3-210ENST00000515420 CCNA2P20248 432 aa11.34□□□□□ -0.59
CLCN3-210ENST00000515420 GZMMP51124 257 aa11.34□□□□□ -0.59
CLCN3-210ENST00000515420 OR2B6P58173 313 aa11.34□□□□□ -0.59
CLCN3-210ENST00000515420 NCALDP61601 193 aa11.34□□□□□ -0.59
CLCN3-210ENST00000515420 CAPRIN1Q14444 709 aaKnown RBP11.34□□□□□ -0.59
CLCN3-210ENST00000515420 C1orf140Q5VVS0 124 aa11.34□□□□□ -0.59
CLCN3-210ENST00000515420 FBXW10Q5XX13 1052 aa11.34□□□□□ -0.59
CLCN3-210ENST00000515420 FAM91A1Q658Y4 838 aa11.34□□□□□ -0.59
CLCN3-210ENST00000515420 SSX8Q7RTT4 187 aa11.34□□□□□ -0.59
CLCN3-210ENST00000515420 SNX32Q86XE0 403 aa11.34□□□□□ -0.59
CLCN3-210ENST00000515420 OR10A6Q8NH74 314 aa11.34□□□□□ -0.59
CLCN3-210ENST00000515420 RP9Q8TA86 221 aaKnown RBP11.34□□□□□ -0.59
CLCN3-210ENST00000515420 RASSF5Q8WWW0 418 aa11.34□□□□□ -0.59
CLCN3-210ENST00000515420 ZNF300Q96RE9 604 aaPredicted RBP11.34□□□□□ -0.59
CLCN3-210ENST00000515420 SF3B5Q9BWJ5 86 aaKnown RBP11.34□□□□□ -0.59
CLCN3-210ENST00000515420 TAPBPLQ9BX59 468 aa11.34□□□□□ -0.59
CLCN3-210ENST00000515420 SLC13A4Q9UKG4 626 aa11.34□□□□□ -0.59
CLCN3-210ENST00000515420 AQP7P3A6NL99 342 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 ELOA3DA6NLF2 546 aaPredicted RBP11.33□□□□□ -0.6
CLCN3-210ENST00000515420 TPST1O60507 370 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 VAMP5O95183 116 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 KLK2P20151 261 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 FPR1P21462 350 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 AQP1P29972 269 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 DNAJA1P31689 397 aaKnown RBP11.33□□□□□ -0.6
CLCN3-210ENST00000515420 RGS8P57771 180 aaPredicted RBP11.33□□□□□ -0.6
CLCN3-210ENST00000515420 DMTNQ08495 405 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 ITGADQ13349 1161 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 VEZF1Q14119 521 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 VMACQ2NL98 169 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 ELOA3BQ3SY89 546 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 SFRP5Q5T4F7 317 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 SWT1Q5T5J6 900 aaKnown RBP11.33□□□□□ -0.6
CLCN3-210ENST00000515420 ERICH5Q6P6B1 374 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 ULK3Q6PHR2 472 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 CCDC80Q76M96 950 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 ARPINQ7Z6K5 226 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 COMTD1Q86VU5 262 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 RANBP3LQ86VV4 465 aaPredicted RBP11.33□□□□□ -0.6
CLCN3-210ENST00000515420 CXorf67Q86X51 503 aaPredicted RBP11.33□□□□□ -0.6
CLCN3-210ENST00000515420 CALHM3Q86XJ0 350 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 ZNF100Q8IYN0 542 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 ELOA3Q8NG57 546 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 OR52E4Q8NGH9 312 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 MFSD8Q8NHS3 518 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 ECSITQ9BQ95 431 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 PARPBPQ9NWS1 579 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 ST6GALNAC2Q9UJ37 374 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 SLC9A8Q9Y2E8 581 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 AP3M1Q9Y2T2 418 aa11.33□□□□□ -0.6
CLCN3-210ENST00000515420 NOSIPQ9Y314 301 aaKnown RBP11.33□□□□□ -0.6
CLCN3-210ENST00000515420 A0A0B4J2E0 115 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 A0A1B0GWA3 101 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 A0A1B0GX12 115 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 DEFB108AA8MXU0 73 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 ZNF814B7Z6K7 855 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 M0QX08 132 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 OR2T1O43869 369 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 MRPL33O75394 65 aaKnown RBP11.32□□□□□ -0.6
CLCN3-210ENST00000515420 AHSA1O95433 338 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 LGI1O95970 557 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 COX5AP20674 150 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 HTR2AP28223 471 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 HOXC5Q00444 222 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 EGR4Q05215 589 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 BNIP2Q12982 314 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 CEACAM7Q14002 265 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 SLC17A1Q14916 467 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 OR7A5Q15622 319 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 NRF1Q16656 503 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 GLIPR1L2Q4G1C9 344 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 BEX5Q5H9J7 111 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 RABL3Q5HYI8 236 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 OTUD3Q5T2D3 398 aaPredicted RBP11.32□□□□□ -0.6
CLCN3-210ENST00000515420 SPATA21Q7Z572 469 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 CCDC103Q8IW40 242 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 OR6S1Q8NH40 331 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 KISS1RQ969F8 398 aaPredicted RBP11.32□□□□□ -0.6
CLCN3-210ENST00000515420 SLC38A4Q969I6 547 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 TMEM45BQ96B21 275 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 APH1AQ96BI3 265 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 SLC47A1Q96FL8 570 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 ARHGDIGQ99819 225 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 ACTR6Q9GZN1 396 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 NSRP1Q9H0G5 558 aaKnown RBP11.32□□□□□ -0.6
CLCN3-210ENST00000515420 PLEKHF2Q9H8W4 249 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 TMEM27Q9HBJ8 222 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 SELENONQ9NZV5 590 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 MALT1Q9UDY8 824 aa11.32□□□□□ -0.6
CLCN3-210ENST00000515420 FLVCR1Q9Y5Y0 555 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms