RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 IKZF5Q9H5V7 419 aa20.36■□□□□ 0.85
CLDND1-230ENST00000514537 NGBQ9NPG2 151 aa20.36■□□□□ 0.85
CLDND1-230ENST00000514537 DLL4Q9NR61 685 aa20.36■□□□□ 0.85
CLDND1-230ENST00000514537 DCTN4Q9UJW0 460 aa20.36■□□□□ 0.85
CLDND1-230ENST00000514537 LIPT2A6NK58 231 aa20.35■□□□□ 0.85
CLDND1-230ENST00000514537 A8MVM7 634 aa20.35■□□□□ 0.85
CLDND1-230ENST00000514537 SMPD2O60906 423 aa20.35■□□□□ 0.85
CLDND1-230ENST00000514537 MRPL33O75394 65 aaKnown RBP20.35■□□□□ 0.85
CLDND1-230ENST00000514537 GPIP06744 558 aa20.35■□□□□ 0.85
CLDND1-230ENST00000514537 IDUAP35475 653 aa20.35■□□□□ 0.85
CLDND1-230ENST00000514537 CDK6Q00534 326 aa20.35■□□□□ 0.85
CLDND1-230ENST00000514537 BNIP2Q12982 314 aa20.35■□□□□ 0.85
CLDND1-230ENST00000514537 CEACAM7Q14002 265 aa20.35■□□□□ 0.85
CLDND1-230ENST00000514537 SHEQ5VZ18 495 aa20.35■□□□□ 0.85
CLDND1-230ENST00000514537 REEP3Q6NUK4 255 aa20.35■□□□□ 0.85
CLDND1-230ENST00000514537 SEZ6L2Q6UXD5 910 aa20.35■□□□□ 0.85
CLDND1-230ENST00000514537 ZNF433Q8N7K0 673 aaPredicted RBP20.35■□□□□ 0.85
CLDND1-230ENST00000514537 NFKBIDQ8NI38 313 aa20.35■□□□□ 0.85
CLDND1-230ENST00000514537 C3orf49Q96BT1 292 aa20.35■□□□□ 0.85
CLDND1-230ENST00000514537 SIKE1Q9BRV8 207 aa20.35■□□□□ 0.85
CLDND1-230ENST00000514537 NPHS2Q9NP85 383 aa20.35■□□□□ 0.85
CLDND1-230ENST00000514537 TRIM33Q9UPN9 1127 aa20.35■□□□□ 0.85
CLDND1-230ENST00000514537 CORO2BQ9UQ03 480 aa20.35■□□□□ 0.85
CLDND1-230ENST00000514537 FLVCR1Q9Y5Y0 555 aa20.35■□□□□ 0.85
CLDND1-230ENST00000514537 ARID1AO14497 2285 aa20.34■□□□□ 0.85
CLDND1-230ENST00000514537 C2CD3Q4AC94 2353 aa20.34■□□□□ 0.85
CLDND1-230ENST00000514537 FRS3O43559 492 aa20.34■□□□□ 0.85
CLDND1-230ENST00000514537 IGHV3-9P01782 118 aa20.34■□□□□ 0.85
CLDND1-230ENST00000514537 PRKAR1BP31321 381 aa20.34■□□□□ 0.85
CLDND1-230ENST00000514537 CAPRIN1Q14444 709 aaKnown RBP20.34■□□□□ 0.85
CLDND1-230ENST00000514537 SLC17A1Q14916 467 aa20.34■□□□□ 0.85
CLDND1-230ENST00000514537 OR7A5Q15622 319 aa20.34■□□□□ 0.85
CLDND1-230ENST00000514537 RUNDC3AQ59EK9 446 aa20.34■□□□□ 0.85
CLDND1-230ENST00000514537 NCMAPQ5T1S8 102 aa20.34■□□□□ 0.85
CLDND1-230ENST00000514537 ATG4DQ86TL0 474 aaPredicted RBP20.34■□□□□ 0.85
CLDND1-230ENST00000514537 UBE2J2Q8N2K1 259 aa20.34■□□□□ 0.85
CLDND1-230ENST00000514537 IGFBPL1Q8WX77 278 aa20.34■□□□□ 0.85
CLDND1-230ENST00000514537 TMEM38AQ9H6F2 299 aa20.34■□□□□ 0.85
CLDND1-230ENST00000514537 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.34■□□□□ 0.85
CLDND1-230ENST00000514537 LEF1Q9UJU2 399 aaPredicted RBP20.34■□□□□ 0.85
CLDND1-230ENST00000514537 FLNAP21333 2647 aaKnown RBP20.33■□□□□ 0.85
CLDND1-230ENST00000514537 EVPLLA8MZ36 301 aa20.33■□□□□ 0.85
CLDND1-230ENST00000514537 HS3ST1O14792 307 aa20.33■□□□□ 0.85
CLDND1-230ENST00000514537 NPIPB7O75200 414 aa20.33■□□□□ 0.85
CLDND1-230ENST00000514537 GGT1P19440 569 aa20.33■□□□□ 0.85
CLDND1-230ENST00000514537 ADSLP30566 484 aaPredicted RBP20.33■□□□□ 0.85
CLDND1-230ENST00000514537 RIPPLY3P57055 190 aa20.33■□□□□ 0.85
CLDND1-230ENST00000514537 HOXC5Q00444 222 aa20.33■□□□□ 0.85
CLDND1-230ENST00000514537 ADRM1Q16186 407 aa20.33■□□□□ 0.85
CLDND1-230ENST00000514537 TIMM23BQ5SRD1 257 aa20.33■□□□□ 0.85
CLDND1-230ENST00000514537 OTUD3Q5T2D3 398 aaPredicted RBP20.33■□□□□ 0.85
CLDND1-230ENST00000514537 ADAM5Q6NVV9 412 aa20.33■□□□□ 0.85
CLDND1-230ENST00000514537 DHRS4L2Q6PKH6 230 aa20.33■□□□□ 0.85
CLDND1-230ENST00000514537 P2RY8Q86VZ1 359 aa20.33■□□□□ 0.85
CLDND1-230ENST00000514537 DPP10Q8N608 796 aa20.33■□□□□ 0.85
CLDND1-230ENST00000514537 TMEM99Q8N816 258 aa20.33■□□□□ 0.85
CLDND1-230ENST00000514537 ZNF611Q8N823 705 aa20.33■□□□□ 0.85
CLDND1-230ENST00000514537 CPPED1Q9BRF8 314 aaPredicted RBP20.33■□□□□ 0.85
CLDND1-230ENST00000514537 ESRP2Q9H6T0 727 aaKnown RBP20.33■□□□□ 0.85
CLDND1-230ENST00000514537 PARPBPQ9NWS1 579 aa20.33■□□□□ 0.85
CLDND1-230ENST00000514537 MALT1Q9UDY8 824 aa20.33■□□□□ 0.85
CLDND1-230ENST00000514537 SLC9A8Q9Y2E8 581 aa20.33■□□□□ 0.85
CLDND1-230ENST00000514537 NDUFAF1Q9Y375 327 aa20.33■□□□□ 0.85
CLDND1-230ENST00000514537 AQP7P3A6NL99 342 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 TMEM229AB2RXF0 380 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 ARHGEF9O43307 516 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 AKR7A3O95154 331 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 FOSL1P15407 271 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 SCARB2Q14108 478 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 PPA1Q15181 289 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 STK11Q15831 433 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 C1orf140Q5VVS0 124 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 METTL21CQ5VZV1 264 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 SSX8Q7RTT4 187 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 KRT73Q86Y46 540 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 P3H2Q8IVL5 708 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 LILRB1Q8NHL6 650 aaPredicted RBP20.32■□□□□ 0.84
CLDND1-230ENST00000514537 STK35Q8TDR2 534 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 TSPEARQ8WU66 669 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 AKAP1Q92667 903 aaKnown RBP eCLIP20.32■□□□□ 0.84
CLDND1-230ENST00000514537 MUCL1Q96DR8 90 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 SPATA5L1Q9BVQ7 753 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 SF3B5Q9BWJ5 86 aaKnown RBP20.32■□□□□ 0.84
CLDND1-230ENST00000514537 TAPBPLQ9BX59 468 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 ASB6Q9NWX5 421 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 RNF115Q9Y4L5 304 aa20.32■□□□□ 0.84
CLDND1-230ENST00000514537 RAI1Q7Z5J4 1906 aaPredicted RBP20.31■□□□□ 0.84
CLDND1-230ENST00000514537 A0A0G2JND7 137 aa20.31■□□□□ 0.84
CLDND1-230ENST00000514537 DPRXA6NFQ7 191 aa20.31■□□□□ 0.84
CLDND1-230ENST00000514537 CD3EP07766 207 aa20.31■□□□□ 0.84
CLDND1-230ENST00000514537 SLC6A2P23975 617 aa20.31■□□□□ 0.84
CLDND1-230ENST00000514537 P2RY4P51582 365 aa20.31■□□□□ 0.84
CLDND1-230ENST00000514537 CASP12Q6UXS9 341 aa20.31■□□□□ 0.84
CLDND1-230ENST00000514537 RETREG3Q86VR2 466 aa20.31■□□□□ 0.84
CLDND1-230ENST00000514537 COMTD1Q86VU5 262 aa20.31■□□□□ 0.84
CLDND1-230ENST00000514537 LSMEM1Q8N8F7 131 aa20.31■□□□□ 0.84
CLDND1-230ENST00000514537 ZIC4Q8N9L1 334 aa20.31■□□□□ 0.84
CLDND1-230ENST00000514537 TMEM45BQ96B21 275 aa20.31■□□□□ 0.84
CLDND1-230ENST00000514537 PIF1Q9H611 641 aa20.31■□□□□ 0.84
CLDND1-230ENST00000514537 TAS2R16Q9NYV7 291 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms