RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 CASP2P42575 452 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 PCP4P48539 62 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 FABP6P51161 128 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 PNLIPRP2P54317 469 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 CDH11P55287 796 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 RAE1P78406 368 aaKnown RBP3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 MRPS22P82650 360 aaKnown RBP3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 SARNPP82979 210 aaKnown RBP3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 CDKL1Q00532 357 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 SF3A3Q12874 501 aaKnown RBP eCLIP3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 SLAMF1Q13291 335 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 THOC5Q13769 683 aaKnown RBP3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 EFR3AQ14156 821 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 DOC2AQ14183 400 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 SLMAPQ14BN4 828 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 PPA1Q15181 289 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 RNPS1Q15287 305 aaKnown RBP3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 TSC22D1Q15714 1073 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 HIST2H2ACQ16777 129 aaPredicted RBP3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 ARL13AQ5H913 290 aaPredicted RBP3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 TCHHL1Q5QJ38 904 aaPredicted RBP3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 PDSS1Q5T2R2 415 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 HIST2H2AA3Q6FI13 130 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 OR4C11Q6IEV9 310 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 C11orf63Q6NUN7 778 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 SLC22A25Q6T423 547 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 MBOAT1Q6ZNC8 495 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 Q6ZT83 130 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 BHLHA15Q7RTS1 189 aaPredicted RBP3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 TMPRSS11BQ86T26 416 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 ZNF329Q86UD4 541 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 TDRPQ86YL5 185 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 UEVLDQ8IX04 471 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 OR4N5Q8IXE1 308 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 LAS2Q8IYD9 372 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 ZCCHC7Q8N3Z6 543 aaKnown RBP3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 OR52B6Q8NGF0 335 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 RDH11Q8TC12 318 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 RNF138Q8WVD3 245 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 NPIPB3Q92617 1050 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 UBE2E3Q969T4 207 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 C3orf49Q96BT1 292 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 MTBPQ96DY7 904 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 WDR34Q96EX3 536 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 CCDC42Q96M95 316 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 COL21A1Q96P44 957 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 F2RL3Q96RI0 385 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 NODALQ96S42 347 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 PKP2Q99959 881 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 EFCAB11Q9BUY7 163 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 NUAK2Q9H093 628 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 NXF5Q9H1B4 397 aaKnown RBP3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 MMP27Q9H306 513 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 FKRPQ9H9S5 495 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 WDR41Q9HAD4 459 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 CXorf21Q9HAI6 301 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 MYNNQ9NPC7 610 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 SMYD2Q9NRG4 433 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 PAK5Q9P286 719 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 KIF17Q9P2E2 1029 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 TRMT6Q9UJA5 497 aaKnown RBP3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 DKKL1Q9UK85 242 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 ZNF490Q9ULM2 529 aaPredicted RBP3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 CORO1CQ9ULV4 474 aaPredicted RBP3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 GRIP1Q9Y3R0 1128 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 MMP24Q9Y5R2 645 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 BIRC6Q9NR09 4857 aa3.17□□□□□ -1.9
PDLIM5-218ENST00000513341 EPPK1P58107 5090 aaKnown RBP3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 A0A087WYN8 130 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 NPIPA5A0A0B4J1W7 369 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 OR5H1A6NKK0 313 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 B9A039 149 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 GOLGA8KD6RF30 607 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 NPIPA7E9PJI5 369 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 M0QZ24 198 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 CLGNO14967 610 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 SCAMP2O15127 329 aaKnown RBP3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 UGT2B11O75310 529 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 REM1O75628 298 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 BCAS2O75934 225 aaPredicted RBP3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 SYNGR4O95473 234 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 STAMBPO95630 424 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 ADAP00813 363 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 MBPP02686 304 aaPredicted RBP3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 GYPCP04921 128 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 ENO1P06733 434 aaKnown RBP3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 YES1P07947 543 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 NPIPA8P0DM63 369 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 DDX5P17844 614 aaKnown RBP3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 TPSB2P20231 275 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 CD22P20273 847 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 PTNP21246 168 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 S1PR1P21453 382 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 NT5EP21589 574 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 GPX3P22352 226 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 PRTN3P24158 256 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 PIK3R1P27986 724 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 AGTR1P30556 359 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 GRK5P34947 590 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 GGT5P36269 586 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms