RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 SURF4O15260 269 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 C1RP00736 705 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 TFAP2AP05549 437 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 ST6GAL1P15907 406 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 PSMC3P17980 439 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 FCARP24071 287 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 CD82P27701 267 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 LAP3P28838 519 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 CALCRP30988 508 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 GABRA5P31644 462 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 DEFA6Q01524 100 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 ID3Q02535 119 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 HSPB3Q12988 150 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 KRT81Q14533 505 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 POU6F1Q14863 301 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 SLC1A5Q15758 541 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 TRIQKQ629K1 86 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZNF544Q6NX49 715 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 FAHD2BQ6P2I3 314 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZNF836Q6ZNA1 936 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 TFAP2DQ7Z6R9 452 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 FITM2Q8N6M3 262 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 NAT16Q8N8M0 369 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 OR9A2Q8NGT5 310 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 PHF10Q8WUB8 498 aaKnown RBP4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 GLYATL1Q969I3 302 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 MSI2Q96DH6 328 aaKnown RBP4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 FAHD2AQ96GK7 314 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 SENP5Q96HI0 755 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 AMDHD1Q96NU7 426 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 QKIQ96PU8 341 aaKnown RBP eCLIP4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 HIST1H2AAQ96QV6 131 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 ACOX2Q99424 681 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 TRMT61BQ9BVS5 477 aaKnown RBP4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 GPR174Q9BXC1 333 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 NPLQ9BXD5 320 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 C1QTNF5Q9BXJ0 243 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 MAP1LC3CQ9BXW4 147 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 CSTL1Q9H114 145 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 ANKHQ9HCJ1 492 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 ABCC13Q9NSE7 274 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 ABHD10Q9NUJ1 306 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 AP5S1Q9NUS5 200 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 PLA2G2EQ9NZK7 142 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 VAPAQ9P0L0 249 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 GUCA1BQ9UMX6 200 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 PRELID3BQ9Y3B1 194 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 AUP1Q9Y679 476 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 COL4A3Q01955 1670 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 PTPRDP23468 1912 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 DOCK8Q8NF50 2099 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 A0A087X0T9 212 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 FAM90A10PA6NDY2 464 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 OTOL1A6NHN0 477 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 METTL15A6NJ78 407 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 VSTM2BA6NLU5 285 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 EVPLLA8MZ36 301 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 H3BNX3 289 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 DLL1O00548 723 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 DSCR3O14972 297 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 PRAF2O60831 178 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZNF217O75362 1048 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 TOX4O94842 621 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 FGF19O95750 216 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 MT-CYBP00156 380 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 GSRP00390 522 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 IFNA21P01568 189 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 UQCRBP14927 111 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 HSD17B3P37058 310 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 MAGEA3P43357 314 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 SLC25A3Q00325 362 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 AESQ08117 197 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 PDIA2Q13087 525 aaKnown RBP4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 SELENBP1Q13228 472 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 DUSP7Q16829 419 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 FAM153CQ494X1 144 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 RAB6CQ53S08 254 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 PIGGQ5H8A4 983 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 C6orf226Q5I0X4 101 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 SERTAD4-AS1Q5TG53 156 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 FRMPD2BQ6IN97 320 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 RPL13AP3Q6NVV1 102 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 LETMD1Q6P1Q0 360 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 WDR59Q6PJI9 974 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 FAM198BQ6UWH4 519 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 C17orf107Q6ZR85 190 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 BHLHA9Q7RTU4 235 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 NRARPQ7Z6K4 114 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 DEFB106AQ8N104 65 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 C2orf73Q8N5S3 287 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 CSNK1A1LQ8N752 337 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 CCDC54Q8NEL0 328 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 GRPEL2Q8TAA5 225 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 HSFY1Q96LI6 401 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 MCEEQ96PE7 176 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 RNF2Q99496 336 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 FOXB1Q99853 325 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 MESP1Q9BRJ9 268 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 TMEM79Q9BSE2 394 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 FOXQ1Q9C009 403 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms