RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 CYBAP13498 195 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 UGT2B7P16662 529 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 HOXD11P31277 338 aaPredicted RBP5.39□□□□□ -1.55
USP38-203ENST00000511739 STT3AP46977 705 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 NKX6-1P78426 367 aaPredicted RBP5.39□□□□□ -1.55
USP38-203ENST00000511739 ZNF45Q02386 682 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 HNF4GQ14541 408 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 DUSP7Q16829 419 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 NHSL2Q5HYW2 709 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 PRAMEF9Q5VWM5 478 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 FRMPD2BQ6IN97 320 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 PODNL1Q6PEZ8 512 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 ZNF767PQ75MW2 155 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 ZNF679Q8IYX0 411 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 CLECL1Q8IZS7 167 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 SCML4Q8N228 414 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 SLC35G3Q8N808 338 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 HPSE2Q8WWQ2 592 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 GTF2H4Q92759 462 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 ZUFSPQ96AP4 578 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 FOXN4Q96NZ1 517 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 MYADMQ96S97 322 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 PAAF1Q9BRP4 392 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 ACKR4Q9NPB9 350 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 KCNJ16Q9NPI9 418 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 TMEM45AQ9NWC5 275 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 INTS6Q9UL03 887 aaKnown RBP5.39□□□□□ -1.55
USP38-203ENST00000511739 STUB1Q9UNE7 303 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 NUDT19A8MXV4 375 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 EIF3FO00303 357 aaPredicted RBP5.39□□□□□ -1.55
USP38-203ENST00000511739 FGF4P08620 206 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 FCGR2AP12318 317 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 GJA4P35212 333 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 RNLSQ5VYX0 342 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 MISPQ8IVT2 679 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 ZNF595Q8IYB9 648 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 TDHQ8IZJ6 230 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 C19orf47Q8N9M1 422 aaKnown RBP5.39□□□□□ -1.55
USP38-203ENST00000511739 MAFAQ8NHW3 353 aaPredicted RBP5.39□□□□□ -1.55
USP38-203ENST00000511739 HAS2Q92819 552 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 CDS1Q92903 461 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 ANKRD9Q96BM1 317 aaPredicted RBP5.39□□□□□ -1.55
USP38-203ENST00000511739 SARAFQ96BY9 339 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 HRASLS5Q96KN8 279 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 IP6K3Q96PC2 410 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 RANBP9Q96S59 729 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 TIMM29Q9BSF4 260 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 SLC12A9Q9BXP2 914 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 BARHL1Q9BZE3 327 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 MMP27Q9H306 513 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 LANCL2Q9NS86 450 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 GPR83Q9NYM4 423 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 SPO11Q9Y5K1 396 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.39□□□□□ -1.55
USP38-203ENST00000511739 A8MV72 311 aaPredicted RBP5.39□□□□□ -1.55
USP38-203ENST00000511739 HIDE1A8MVS5 230 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 RAB27BO00194 218 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 RFXAPO00287 272 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 CDK2AP1O14519 115 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 EFSO43281 561 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 EIF1BO60739 113 aaKnown RBP5.39□□□□□ -1.55
USP38-203ENST00000511739 SLC22A5O76082 557 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 ARAFP10398 606 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 MGST1P10620 155 aaKnown RBP5.39□□□□□ -1.55
USP38-203ENST00000511739 HOXA11P31270 313 aaPredicted RBP5.39□□□□□ -1.55
USP38-203ENST00000511739 SLC6A11P48066 632 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 RAB15P59190 212 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 RIPPLY1Q0D2K3 151 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 KCNAB2Q13303 367 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 EXT1Q16394 746 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 RPS26P11Q5JNZ5 115 aaPredicted RBP5.39□□□□□ -1.55
USP38-203ENST00000511739 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.39□□□□□ -1.55
USP38-203ENST00000511739 HACD4Q5VWC8 232 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 SBSNQ6UWP8 590 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 DPPA4Q7L190 304 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 PDZD9Q8IXQ8 264 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 C1orf87Q8N0U7 546 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 CISD2Q8N5K1 135 aaKnown RBP5.39□□□□□ -1.55
USP38-203ENST00000511739 GLIS1Q8NBF1 620 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 CNIH3Q8TBE1 160 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 NANPQ8TBE9 248 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 DUSP19Q8WTR2 217 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 SLAMF9Q96A28 289 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 APH1AQ96BI3 265 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 MENTQ9BUN1 341 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 PROCRQ9UNN8 238 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 PRELID1Q9Y255 219 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 ZNF337Q9Y3M9 751 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 PCDHGA7Q9Y5G6 932 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 ANKRD61A6NGH8 418 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 FAM72CH0Y354 149 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 RNASET2O00584 256 aaKnown RBP5.39□□□□□ -1.55
USP38-203ENST00000511739 DPM1O60762 260 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 STSP08842 583 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 ZNF865P0CJ78 1059 aaPredicted RBP5.39□□□□□ -1.55
USP38-203ENST00000511739 DCTP40126 519 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 MAP4K2Q12851 820 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 MFAP5Q13361 173 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 FAM72AQ5TYM5 149 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 SHEQ5VZ18 495 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms