RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 KLK7P49862 253 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 GPM6AP51674 278 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 EFNB2P52799 333 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 ARFIP1P53367 373 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 WNT4P56705 351 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 PRPS1P60891 318 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 NCBP1Q09161 790 aaKnown RBP2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 PSG7Q13046 419 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 GPM6BQ13491 265 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 ZNF630Q2M218 657 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 CCDC14Q49A88 953 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 TIGD3Q6B0B8 471 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 OR4F3Q6IEY1 312 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 OR52E8Q6IFG1 317 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 CASC1Q6TDU7 716 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 Q6ZPB1 254 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 RNF165Q6ZSG1 346 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 UTS2BQ765I0 119 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 NLRP9Q7RTR0 991 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 CATSPER1Q8NEC5 780 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 UCN3Q969E3 161 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 RPUSD4Q96CM3 377 aaKnown RBP2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 CXorf40BQ96DE9 158 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 PAGE5Q96GU1 130 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 TMEM101Q96IK0 257 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 CCNL2Q96S94 520 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 HIST1H4GQ99525 98 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 TMEM43Q9BTV4 400 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 NHEJ1Q9H9Q4 299 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 SMOXQ9NWM0 555 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 THUMPD1Q9NXG2 353 aaKnown RBP2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 BFARQ9NZS9 450 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 NYAP2Q9P242 653 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 KIF25Q9UIL4 384 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 POLDIP2Q9Y2S7 368 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 RPL36Q9Y3U8 105 aaKnown RBP2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 CDH10Q9Y6N8 788 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 ARHGAP23Q9P227 1491 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 SH3TC1Q8TE82 1336 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 PLEKHG1Q9ULL1 1385 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 IGHV3OR16-13A0A075B7E8 117 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 IGKV1D-8A0A087WSZ0 117 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 TRAV26-1A0A087WT03 109 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 IGHV1OR21-1A0A087WYE8 117 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 TCRBV9S1A1TA0A576 114 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 A8MUA0 341 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 TRIM49D1C9J1S8 452 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 KLK3P07288 261 aaPredicted RBP2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 CALRP27797 417 aaKnown RBP2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 HTR1EP28566 365 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 PTGDSP41222 190 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 GRIA1P42261 906 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 HLCSP50747 726 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 AIF1P55008 147 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 ACTR1AP61163 376 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 RPS14P62263 151 aaKnown RBP2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 ASPHQ12797 758 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 IL24Q13007 206 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 CHIT1Q13231 466 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 PLD1Q13393 1074 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 GRB7Q14451 532 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 BCL7AQ4VC05 210 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 KLF17Q5JT82 389 aaPredicted RBP2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 MARCH8Q5T0T0 291 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 PDZK1Q5T2W1 519 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 GPRC6AQ5T6X5 926 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 TMIGD1Q6UXZ0 262 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 PGAP1Q75T13 922 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 SLC26A11Q86WA9 606 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 RNF175Q8N4F7 328 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 MFSD9Q8NBP5 474 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 OR5D13Q8NGL4 314 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 FBXO30Q8TB52 745 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 FANK1Q8TC84 345 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 BRSK1Q8TDC3 778 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 UBE2E3Q969T4 207 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 ELSPBP1Q96BH3 223 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 SLC38A2Q96QD8 506 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 COPS8Q99627 209 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 CRACR2AQ9BSW2 395 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 CAPS2Q9BXY5 557 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 SELENOIQ9C0D9 397 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 ACTR6Q9GZN1 396 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 SUDS3Q9H7L9 328 aaPredicted RBP2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 SLC25A22Q9H936 323 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 NOTCH2Q04721 2471 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 PNPLA6Q8IY17 1366 aa2.35□□□□□ -2.03
TRAPPC11-207ENST00000511409 FRMPD3Q5JV73 1810 aa2.34□□□□□ -2.03
TRAPPC11-207ENST00000511409 NSG1A0A0A6YYJ2 146 aa2.34□□□□□ -2.03
TRAPPC11-207ENST00000511409 GOLGA8SH3BPF8 625 aa2.34□□□□□ -2.03
TRAPPC11-207ENST00000511409 GFYI3L273 518 aa2.34□□□□□ -2.03
TRAPPC11-207ENST00000511409 MPHOSPH10O00566 681 aaKnown RBP2.34□□□□□ -2.03
TRAPPC11-207ENST00000511409 SPAG6O75602 509 aa2.34□□□□□ -2.03
TRAPPC11-207ENST00000511409 IGHG4P01861 327 aa2.34□□□□□ -2.03
TRAPPC11-207ENST00000511409 GIPP09681 153 aaPredicted RBP2.34□□□□□ -2.03
TRAPPC11-207ENST00000511409 POU2F1P14859 743 aa2.34□□□□□ -2.03
TRAPPC11-207ENST00000511409 ABOP16442 354 aa2.34□□□□□ -2.03
TRAPPC11-207ENST00000511409 CXCR2P25025 360 aa2.34□□□□□ -2.03
TRAPPC11-207ENST00000511409 CCR1P32246 355 aa2.34□□□□□ -2.03
TRAPPC11-207ENST00000511409 SSR1P43307 286 aaKnown RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms